Sequence detailsbmy_09809 (Coding sequence)

Part of scaffold_490 (SequenceType object (1))

For more information consult the page for scaffold_490 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXB1ENSBTAG00000007603 (Cow)

Gene Details

homeobox protein Hox-B1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009997, Cow)

Protein Percentage 91.95%
cDNA percentage 93.62%
Ka/Ks Ratio 0.25193 (Ka = 0.0404, Ks = 0.1604)

Additional orthologs identified in other species via the OPTIC pipeline.

HOXB1 (Human)   Hoxb1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 897 bp    Location:544890..546222   Strand:+
Raw sequence 
>bmy_09809
ATGGACTATAATAGGATGAACTCCTTCTTAGAGTACCCACTCTGTAACCGGGCACCCAGCGCCTACAGCGCCCCTACCTCTTTCCCCCCCAGCTCGGCTCCCTCTGTTGACAGCTATGCAGGCGAGACCCGCTATGGTGGGGGGCTGCCCAGCCCCGCGCTCCAGCAGAACTCAGGCTATCCGGCCCAGCACCCGCCCTCGGCGTTAGGGGTGCCCTTCCCCAGCTCCGCGACCTCGGGGTACGCCCCGGCTGCCTGCAGCCCCAGCTACGGGCCTTCTCAGTACTACCCTCTGGGCCAGCCGGAAGGAGATGGAGGCTATTTTCATCCTTCAAGCTATGGGGCCCAGCTAGGGGCCTTGTCCGACGGCTATGGAACCGCTGGAACGGGCCCGGGGCCGTACCCTCCGCCGCAGCCCCCTTACGGGAACGAGCAGACAGGGAACTTTGCACCGGCCTATGCTGAGCTCCTCTCCGAGGCCAAGGAATCGCCCTGCCCGTCAGAAACCAGCCTCCCCACAGCCCGGACCTTCGACTGGATGAAGGTTAAGAGGAACCCACCCAAGACAGCGAAGGTGTCCGAGCTGGGCCTGGGCGCGCCCGGTGGCCTCCGCACCAACTTCACCACGCGGCAGCTGACCGAGCTGGAGAAGGAGTTCCATTTCAACAAGTACCTGAGCCGGGCCCGGAGGGTGGAGATCGCCGCCACCCTGGAGCTCAACGAGACGCAGGTCAAGATTTGGTTCCAGAACCGGCGCATGAAGCAGAAGAAGCGCGAGCGGGAGGGAGGCCGGGTGCCCCCAGCCCCTTCAGGCTGTCCCAAGGAGGCGGCTGGAGACGCCTCCGACCAGTCCACGTGCACCTCCCCGGAAGCTTCGCCCAGCTCCGTCACCTCCTGA

Related Sequences

bmy_09809T0 SequenceType object (3)

Length: 299 aa      View alignments
>bmy_09809T0
MDYNRMNSFLEYPLCNRAPSAYSAPTSFPPSSAPSVDSYAGETRYGGGLPSPALQQNSGYPAQHPPSALGVPFPSSATSGYAPAACSPSYGPSQYYPLGQPEGDGGYFHPSSYGAQLGALSDGYGTAGTGPGPYPPPQPPYGNEQTGNFAPAYAELLSEAKESPCPSETSLPTARTFDWMKVKRNPPKTAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGGRVPPAPSGCPKEAAGDASDQSTCTSPEASPSSVTS*