Part of scaffold_500 (Scaffold)

For more information consult the page for scaffold_500 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC38A1 ENSTTRG00000017104 (Bottlenosed dolphin)

Gene Details

solute carrier family 38, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016218, Bottlenosed dolphin)

Protein Percentage 88.76%
cDNA percentage 89.98%
Ka/Ks Ratio 0.71764 (Ka = 0.1006, Ks = 0.1402)

SLC38A1 ENSBTAG00000000859 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001147, Cow)

Protein Percentage 95.77%
cDNA percentage 93.8%
Ka/Ks Ratio 0.12438 (Ka = 0.0242, Ks = 0.1942)

SLC38A1  (Minke Whale)

Gene Details

solute carrier family 38, member 1

External Links

Gene match (Identifier: BACU007952, Minke Whale)

Protein Percentage 99.71%
cDNA percentage 99.42%
Ka/Ks Ratio 0.08121 (Ka = 0.0014, Ks = 0.0171)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1071 bp    Location:509389..494535   Strand:-
>bmy_09836
ATGGTTTATGAAAAGCTGGGAGAACAGGTCTTTGGCACCACAGGGAAACTTGTCATCTTTGGAGCCACCTCCCTACAGAACACTGGAGCAATGCTGAGCTACCTCTTCATAGTAAAAAACGAACTGCCCTCTGCCATAAAGTTTCTAATGGGAAAGGAAGAGACATTTTCAGCCTGGTACGTGGATGGCCGTCTTCTGGTGGTGGTAGTTACCTTTGGCATAATTCTCCCTCTGTGTCTCTTGAAGAACTTAGGCTATCTTGGCTATACTAGTGGATTTTCCTTGAGCTGTATGGTTTTTTTCCTAATTGTGGTTATATACAAGAAATTTCAAATTCCCTGCATTGTTCCAGAGCTAAATTCAACAATAAGTGCTAATTCAACAAATGCTGCCATGTGTACGCCAAAATATGTTACCTTCAATTCAAAGACCGTGTACGCTTTACCAACAATTGCATTTGCATTTGTCTGCCACCCGTCTGTCCTGCCAATTTACAGCGAGCTTAAAGATCGATCACAGAAAAAGATGCAGATGGTTTCAAATATCTCCTTTTTCGCCATGTTTGTTATGTATTTCTTGACTGCCATTTTTGGCTACTTGACATTCTATGAAAATGTGCATTCGGACCTCCTCCACAAGTATCAGAGTAAAGATGACATCCTCATCCTGACCGTGCGGCTGGCTGTCATTGTCGCCGTCATCCTCACGGTGCCGGTGTTATTTTTCACGGTTCGTTCTTCTTTATTTGAACTGGCTAAGAAAACAAAGTTTAATTTATGTCGTCATGTCTTGGTGACCTTCATACTCCTGGTTATTATCAACTTGTTGGTGATCTTCATACCCTCCATGAAGGATATTTTTGGAGTCGTAGGAGTTACGTCTGCAAATATGCTTATTTTCATTCTTCCTTCATCTCTTTATTTAAAAATCACAAGCCAAGATGGAGATAAAGGAACTCAACAAATTTGGGCTGCCCTTTTCTTGGGTCTGGGGGTGTTGTTTTCCCTGGTCAGCATTCCCTTGGTTATCTACGACTGGGCCTGCTCATCAAGTGGTGATGAAGGCCACTGA

Related Sequences

bmy_09836T0 Protein

Length: 357 aa      View alignments
>bmy_09836T0
MVYEKLGEQVFGTTGKLVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRLLVVVVTFGIILPLCLLKNLGYLGYTSGFSLSCMVFFLIVVIYKKFQIPCIVPELNSTISANSTNAAMCTPKYVTFNSKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVMYFLTAIFGYLTFYENVHSDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFTVRSSLFELAKKTKFNLCRHVLVTFILLVIINLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITSQDGDKGTQQIWAALFLGLGVLFSLVSIPLVIYDWACSSSGDEGH*