Part of scaffold_516 (Scaffold)

For more information consult the page for scaffold_516 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTRC ENSTTRG00000015758 (Bottlenosed dolphin)

Gene Details

chymotrypsin C (caldecrin)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014931, Bottlenosed dolphin)

Protein Percentage 91.7%
cDNA percentage 95.44%
Ka/Ks Ratio 0.36038 (Ka = 0.0381, Ks = 0.1056)

CTRC ENSBTAG00000024497 (Cow)

Gene Details

Chymotrypsin-C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033942, Cow)

Protein Percentage 88.38%
cDNA percentage 89.9%
Ka/Ks Ratio 0.11901 (Ka = 0.0569, Ks = 0.478)

CTRC  (Minke Whale)

Gene Details

chymotrypsin C (caldecrin)

External Links

Gene match (Identifier: BACU005668, Minke Whale)

Protein Percentage 55.28%
cDNA percentage 64.18%
Ka/Ks Ratio 0.19165 (Ka = 0.367, Ks = 1.915)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 966 bp    Location:515329..511065   Strand:-
>bmy_09928
CCCAACCTATCAGCCCGGGTGGTGGGCGGAGACAACGCCGTTCCCCACAGCTGGCCCTGGCAGATCTCCCTCCAATACCTCAAGAATGGCACGTGGAGGCACACCTGCGGAGGCACCTTGATCACCCCCAATCACGTCCTCACAGCTGCCCACTGCATCAGCAATACCCTGACTTACCGCGTGGGCCTGGGGAAGAACAACCTGGAGGTGGAGAATGAGGAAGGCTCCCTGTTCGTGGGCGTGGACACCATCTTTGTCCACAAGAAGTGGAACTCCTTCCTAATTCGACACAAGGTGGTGCGGGGTGGGGGGGAAGAAGCTACACCTACAGGAGCGGGTGATGGGGTTAGAAGGCAGATCATTGCTCCTCCGGCATCTCTGTCTGCCAGTAAGAAGCTGGAGGTCCAGAATGTTTACAGAGGATCCCTGCTCACCCTTGGCCCGACTCCCAACTCACAGCTTGGGTCTCTTAGCATTGGCTTGGGGGACCAGGCCCTCCTGCCATTCACCACCTCCACTTTGGATTCCAGCAATGACATTGCCCTTATCAAACTGGCGGAGACCGTGGAACTGAGTGACACCATCCAGCTAGCCTGCCTGCCAGAGGAGGGTTCCTTGCTGCCTCAGGACTACCCCTGCTACGTCACTGGCTGGGGCCGTCTCCGGACCAACGGCCCCATCGCTGATGAGCTGCAGCAGGGCCTGCAGCCCGTGGTGGATCACGCCACGTGCTCCCAGAAGGACTGGTGGGGCACCATGGTGAAGCACACCATGGTCTGCGCCGGGGGTGATGGCGTCATCTCAGCCTGCAACGGGGACTCGGGCGGCCCGCTAAACTGCCAGGCCCAGGACGGCTCTTGGGAGTTGCGGGGCATTGTCAGCTTCGGCTCCGGGCTGAGCTGCAACACCCTCAGGAAGCCTACGGTCTTCACCCGCGTGTCCGCCTACATCAACTGGATCAACCAG

Related Sequences

bmy_09928T0 Protein

Length: 322 aa      View alignments
>bmy_09928T0
PNLSARVVGGDNAVPHSWPWQISLQYLKNGTWRHTCGGTLITPNHVLTAAHCISNTLTYRVGLGKNNLEVENEEGSLFVGVDTIFVHKKWNSFLIRHKVVRGGGEEATPTGAGDGVRRQIIAPPASLSASKKLEVQNVYRGSLLTLGPTPNSQLGSLSIGLGDQALLPFTTSTLDSSNDIALIKLAETVELSDTIQLACLPEEGSLLPQDYPCYVTGWGRLRTNGPIADELQQGLQPVVDHATCSQKDWWGTMVKHTMVCAGGDGVISACNGDSGGPLNCQAQDGSWELRGIVSFGSGLSCNTLRKPTVFTRVSAYINWINQ