Part of scaffold_519 (Scaffold)

For more information consult the page for scaffold_519 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RGP1 ENSTTRG00000011928 (Bottlenosed dolphin)

Gene Details

RGP1 retrograde golgi transport homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011314, Bottlenosed dolphin)

Protein Percentage 99.17%
cDNA percentage 99.17%
Ka/Ks Ratio 0.22392 (Ka = 0.0041, Ks = 0.0182)

BT.33487 ENSBTAG00000011433 (Cow)

Gene Details

retrograde Golgi transport protein RGP1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015196, Cow)

Protein Percentage 92.01%
cDNA percentage 90.54%
Ka/Ks Ratio 0.23634 (Ka = 0.0568, Ks = 0.2402)

RGP1  (Minke Whale)

Gene Details

RGP1 retrograde golgi transport homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU019878, Minke Whale)

Protein Percentage 99.45%
cDNA percentage 99.72%
Ka/Ks Ratio 1.0393 (Ka = 0.0028, Ks = 0.0027)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1272 bp    Location:827112..821783   Strand:-
>bmy_09964
GGACGCTTCCGGCCGGAAGGGGCTCCGAGGGGGAAGAGGTGTGGGGGGCCGAGGGAAGTCCCGCCTCTGCCGTGGCCGCAGCCACGCACTAAGGTCCCGGCCCGGAGGGGTGGGCGACCGAGGGCCTCGGTGCACCGAGCCCCCAGTTTCGACCGTGCGAGATCCGATTCCGGAGCTGCCATGATTGAAGTGGTAGCAGAGCTGAGCAGAGGTCCTGTGTTTCTGGCAGGGGAGGCGCTGGAGTGTGTGGTGACCGTCACCAACCCCCTGCCCCCCACGGCCACTTCTGCATCCAGTGAGGCTCTGGCATGGGCCAGTGCCCAAATCCACTGCCAGTTCCATGCCAGTGAGAGTCGAGTAGCACTGCCTCCCCCTGACTCCAGTCAGCCAGATGTCCAGCCTGAGAGCCAGACTGTCTTTCTACCACACCGAGACTCCTACAGCGAAGTGCTGCCTATAGAGGGACCACCCTCCTTTCGGGGTCAGTCAGTCAAGTATGTCTACAAACTGACCATTGGCTGCCAGCGTGTCAACTCACCCATCACTTTACTCAGGGTCCCTCTGAGGGTTCTTGTGCTGACTGGCCTTCAAGATGTCCGCTTTCCCCAGGAGGAGGCAGTAGCCCCATCCAGTCCATTCTTGGAAGAGGATGAATGTGGCAAGAAGGACTCATGGCTCACTGAGCTGGCTGGGGAGCGCCTCATGGCTGCCACATCCTGCCGCAGCCTCCATCTGTACAACATCAGTGATGGCCGAGGAAAAGTTGGGACATTTGGCATCTTCAAATCTGTATACAGACTTGGCGAGGACGTGGTGGGGACCTTAAACTTAGGGGAAGGAACTGTAGCTTGTTTGCAGTTTTCAGTGAGCTTACAGACGGAGGAGCGTGTGCAGCCTGAGTACCAGCGGCGCCGCGGGGCAGGGGGTGCCCCCTCTGTGTCTCATGTCACTCATGCCCGGCACCAGGAGTCCTGCCTACATACAACCAGAACGAGCTTCTCCCTCCCCATCCCTCTCAGCTCCACACCAGGCTTCTGCACAGCCGTTGTATCCCTGAAGTGGCGTTTGCATTTTGAATTTGTAACATCCCGAGAACCAGGTTTGGTGCTTCTACCTCCCATGGAACAGCCCGAGCCTGTCACCTGGACAGGGCCTGAGCAAGTGCCCGTGGACACCTTCAGCTGGGACCTCCCCATCAAGGTGCTGCCTACAAGCCCTACCCTGGCCTCATATGCGGCCCCAGGCCCCAGCACCAGCACCATAACCATCTGA

Related Sequences

bmy_09964T0 Protein

Length: 424 aa      View alignments
>bmy_09964T0
GRFRPEGAPRGKRCGGPREVPPLPWPQPRTKVPARRGGRPRASVHRAPSFDRARSDSGAAMIEVVAELSRGPVFLAGEALECVVTVTNPLPPTATSASSEALAWASAQIHCQFHASESRVALPPPDSSQPDVQPESQTVFLPHRDSYSEVLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQDVRFPQEEAVAPSSPFLEEDECGKKDSWLTELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGTLNLGEGTVACLQFSVSLQTEERVQPEYQRRRGAGGAPSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAVVSLKWRLHFEFVTSREPGLVLLPPMEQPEPVTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYAAPGPSTSTITI*