Sequence details bmy_09972 (Coding sequence)

Part of scaffold_519 (Scaffold)

For more information consult the page for scaffold_519 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIT1 ENSTTRG00000011918 (Bottlenosed dolphin)

Gene Details

signaling threshold regulating transmembrane adaptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011302, Bottlenosed dolphin)

Protein Percentage 93.05%
cDNA percentage 95.54%
Ka/Ks Ratio 0.69596 (Ka = 0.0414, Ks = 0.0594)

SIT1 ENSBTAG00000011411 (Cow)

Gene Details

signaling threshold-regulating transmembrane adapter 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043466, Cow)

Protein Percentage 82.89%
cDNA percentage 85.74%
Ka/Ks Ratio 0.41051 (Ka = 0.1185, Ks = 0.2885)

Additional orthologs identified in other species via the OPTIC pipeline.

SIT1 (Human)   Sit1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 564 bp    Location:913130..914432   Strand:+
Raw sequence 
>bmy_09972
ATGCCTGCAAATTCGGCTTCCGTACCATCAGGTCTGAGCAGAAGTGACAACTGCACGGATCTGCTAGTGCCTGGAATCCCCTCCGTGACCAAGGCCTGGGGACTATGGGCCCTCTTAGGGGTTGTGACGCTGCTGCTTCTCATCTCACTGGCTGTGCACTTATTCCAGTGGACTAGTGGCTGGAGCAGGAGCCATCCGGGACAGGGACGGCCTGGAGAGTCTGCGGAAGAGGTCCCGCTGTACGGGAACCTGCATTATCTGCAGACAGGACGGCTGTCTCAAGAACCGGGGCCAGACCAACAGGATCCAACACCTGGAGGCCCTGCCAGGGCTGCAGAGGAGGTGATGTGCTATACCAGCCTGCAGCTGCGGCCTCCTCAGGGCCGGATCCCCAGCCCTGGAAGCCCCATCAAGTACTCGGAGGTGGTGCTGGACCCTGAGCCAAAGCCCCAGGCCTCGAGCCCCGAGCCGGAGCTCTACGCCTCAGTGTGTGCCCAGACCCGCAGAGCCCGGGCTTCCTTTCCAGACCAGGCCTACGCCAACAGCCAGCCTGCACCCAGCTGA

Related Sequences

bmy_09972T0 Protein

Length: 188 aa      View alignments
>bmy_09972T0
MPANSASVPSGLSRSDNCTDLLVPGIPSVTKAWGLWALLGVVTLLLLISLAVHLFQWTSGWSRSHPGQGRPGESAEEVPLYGNLHYLQTGRLSQEPGPDQQDPTPGGPARAAEEVMCYTSLQLRPPQGRIPSPGSPIKYSEVVLDPEPKPQASSPEPELYASVCAQTRRARASFPDQAYANSQPAPS*