Part of scaffold_502 (Scaffold)

For more information consult the page for scaffold_502 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZCCHC11 ENSTTRG00000016142 (Bottlenosed dolphin)

Gene Details

zinc finger, CCHC domain containing 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015306, Bottlenosed dolphin)

Protein Percentage 98.1%
cDNA percentage 98.58%
Ka/Ks Ratio 0.31584 (Ka = 0.0102, Ks = 0.0324)

ZCCHC11 ENSBTAG00000002721 (Cow)

Gene Details

terminal uridylyltransferase 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003525, Cow)

Protein Percentage 93.84%
cDNA percentage 95.7%
Ka/Ks Ratio 0.2943 (Ka = 0.0303, Ks = 0.1029)

ZCCHC11  (Minke Whale)

Gene Details

zinc finger, CCHC domain containing 11

External Links

Gene match (Identifier: BACU000266, Minke Whale)

Protein Percentage 16.14%
cDNA percentage 34.88%
Ka/Ks Ratio 0.17229 (Ka = 1.4449, Ks = 8.3862)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2535 bp    Location:671799..632852   Strand:-
>bmy_09991
ATGTCAAAGGTTATAACAGCATTTTTACCAGAGTGTTCACTTAGGTTGTATGGCTCGTCTCTGACTAAGTTTGCTCTGAAAAGTAGTGATGTTAATATAGATATAAAATTTCCTCCCAAGATGAATCATCCAGATCTTCTGATACAAGTGCTTGGGATTTTAAAAAAAAGTGTATTATATGTAGATGTGGAATCTGATTTTCACGCTAAAGTTCCTGTTGTGGTGTGCAAAGATCGGAAAAGTGGTTTACTTTGTAGAGTGAGTGCAGGAAATGATATGGCATGCCTCACTACTGATTTACTTGCTGCTCTTGGCAAAATGGAACCTGTCTTTACTCCCTTGGTGTTAGCCTTTCGCTATTGGGCTAAGTTGTGCTATATTGACTCCCAAACTGATGGCGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGATGTTTTTTCTACAACAAAGAAAACCCCCTCTTCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACCCAAAAAGAATGGATGACTTTCAGCTGAAGGGCATAGTAGAAGAGAAGTTTGTGAAGTGGGAATATAATTCAAGTAGTGCAACTGAGAAAAACTCAATTGCTGAGGAAAACAAAGCTAAGGCAGACCAACCAAAAGATGATACCAAGAAGACAGAAACAGACAACCAAAGTAATGCCATGAAGGAAAAACATGGCAAAGAATACGTCATATGTGTACGGATACAAGATATTTTAACAAGAGAAAACAAAAACTGGCCTAAAAGGCGAATAGCCATTGAAGATCCATTTTCAATCAAGAGGAATGTTGCACGGAGCTTAAACAGCCAGCTTGTTTATGAATATGTTGTGGAGAGATTCAGGGCAGCTTATCGGTATTTTGCCTGTCCTCAGAGGAAGGGTGGAAATAAATCTACAGTGGATTCCATTAAAAAAGAGAAGGGAAAAATAAGCAATAAGAAACCAGTGAAGTCTGAAAATATGGCATCCAGTTGTTGCATTCTCCTTGGGGAAAGCACAGAAAAAATAAGTGCAGAAAGAGGTCAGCCTGATAAATATGAAGAAATGGAATGTACATCACAGAGATGTATTACTGAAGATGATAATTTGTTGATAAATGAACTAGATTTGGCTGAACATGGACAGGAATCTTCATCTCTTTCCACCAATGAAAGCAGTGAATTAGAGCCAAAATCAATTAAGAAACAAGATGTTTTAGTACCTTCAGAAACTTGTTTTAAAAAGGAGCTCACCCAGTATAATTGCATTGATTGTAAATCCCCTGAACCAGATGAATCTGCTGGTACAGACTGCAGGTCAAATTTAGAAACAGAAAGTTCACAGCACATTGTATGCACTGACACATCTGCTACCTCTTGCAACTGCAAAGCTGCAGAAGATGCTTCTGACCTTAATGATGATGATAACCACCCCACCCAGGAATTATATTTTGTGTTTGATAAGTTTATTTTAACCTCTGGCAAGCCGCCAACAATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAAACTGATTGCCCAGAGGATTTCAGGAAAATTGATCTAAAGCCTCTACCACCAATGACAAATCGATTTCGGGAAATACTTGATTTAGTATGTAAAAGATGTTTTGATGAATTGTCACCACCTTTTTCTGAACAACACAACAGGGAGCAAATTTTAATTGGCTTGGAAAAGTTTATTCAAAAAGAATATGATGAAAAGGCAAGATTGTGCTTATTTGGCTCTTCTAAGAATGGATTTGGATTTCGTGATAGTGATCTGGATATTTGTATGACCCTTGAAGGCCATGAAAATGCAGAGAAATTAAATTGTAAGGAAATAATTGAAAATTTGGCGAAAATTCTTAAGAGACATCCAGGTTTAAGAAACATTTTGCCTATAACTACTGCCAAAGTGCCTATAGTAAAATTTGAACACAGACGAAGTGGTTTAGAAGGCGATATCAGTTTATATAATACGTTGGCTCAGCATAACACAAGAATGCTAGCTACATATGCAGCTATTGATCCTAGAGTGCAGTACTTGGGATATACTATGAAAGTGTTTGCTAAGCAGAGAAAACCACCTGTTATCCCAGTTCTACAAGAGATCTTTGATGGAAAACAGATTCCACAGAGAATGGTTGATGGATGGAATGCTTTTTTCTTTGATAAAACAGAAGAACTGAAAAAACGTTTACCTTCACTTGGAAAGAACACAGAAACATTAGGAGAGCTTTGGTTGGGACTGCTTCGCTTCTATACTGAAGAATTTGATTTCAAAGAATATGTAATTAGCATTCGGCAGAAAAAGCTATTGACAACTTTTGAGAAGCAGTGGACATCCAAATGCATTGCGATTGAAGACCCTTTTGATTTGAATCATAACCTTGGTGCTGGAGTTTCTAGAAAAATGACCAATTTCATCATGAAAGCATTTATCAATGGAAGGAAACTTTTTGGTACCCCCTTTTATCCACTCATTGGCAGAGAAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTGGTAG

Related Sequences

bmy_09991T0 Protein

Length: 845 aa      View alignments
>bmy_09991T0
MSKVITAFLPECSLRLYGSSLTKFALKSSDVNIDIKFPPKMNHPDLLIQVLGILKKSVLYVDVESDFHAKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLKGIVEEKFVKWEYNSSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKEYVICVRIQDILTRENKNWPKRRIAIEDPFSIKRNVARSLNSQLVYEYVVERFRAAYRYFACPQRKGGNKSTVDSIKKEKGKISNKKPVKSENMASSCCILLGESTEKISAERGQPDKYEEMECTSQRCITEDDNLLINELDLAEHGQESSSLSTNESSELEPKSIKKQDVLVPSETCFKKELTQYNCIDCKSPEPDESAGTDCRSNLETESSQHIVCTDTSATSCNCKAAEDASDLNDDDNHPTQELYFVFDKFILTSGKPPTIVCSICKKDGHSKTDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFDELSPPFSEQHNREQILIGLEKFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRKLFGTPFYPLIGREANFFFFFFFFW*