Sequence detailsbmy_10002 (Coding sequence)

Part of scaffold_506 (SequenceType object (1))

For more information consult the page for scaffold_506 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAMD11ENSTTRG00000003186 (Bottlenosed dolphin)

Gene Details

sterile alpha motif domain containing 11

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002988, Bottlenosed dolphin)

Protein Percentage 94.11%
cDNA percentage 94.51%
Ka/Ks Ratio 0.17988 (Ka = 0.0148, Ks = 0.0823)

SAMD11ENSBTAG00000008739 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011517, Cow)

Protein Percentage 93.65%
cDNA percentage 92.99%
Ka/Ks Ratio 0.14501 (Ka = 0.0323, Ks = 0.2225)

SAMD11 (Minke Whale)

Gene Details

sterile alpha motif domain containing 11

External Links

Gene match (Identifier: BACU001194, Minke Whale)

Protein Percentage 98.5%
cDNA percentage 98.6%
Ka/Ks Ratio 0.20295 (Ka = 0.0074, Ks = 0.0364)

Additional orthologs identified in other species via the OPTIC pipeline.

SAMD11 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 2007 bp    Location:38690..56106   Strand:+
Raw sequence 
>bmy_10002
ATGTCCAAGGGGATCCTGCAGGTGCATCCTCCGATCTGCGACTGTCCCGGCTGTCGAATATCCTCCCCGGTGAACCGGGGGCGGCTGGCGGACAAGAGGACAGTTGCCTTGCCCCCTGCCCGCGTCCTGAAGAAGGAGCTGACCCCAAGCTTCTCAGCCAGTGGTGACAGTGACAGGAGTGGCCCGGCCTGTGGGCAGCGGCTGGGCTTGAAGCAGGAGGACGACCCGCATGTCCGTATCATGAAAAGAAGAGTCCACACCCACTGGGATGTGAACATCTCCTTCCGAGAGACGTCCTGCAGCCAGGACGGCGACCTTCCCACCCTCATCTCCAGCGTGCATCGCAGCCGCCACCTCGTTATGCCCGAGCATCAGAGCCGCTGTGAATTCCAGAGAGGCGGCGTGGAGGTTGGCCTGGGAGCCGCAGGTGACCTGTTGGGCAAGAGGCTGGGTCGCTCCCCCCACATCAGCAGTGACTGCCCTTCGGAGAAGAAGGCCCGAAGCAAGTCCCCTCAAGAGGCTCTGTTGCTTCCGGAACTAGGGCCCGGCATGGCCCCCGAGGATCATTACCGCCGGCTGGTGTCCGCCCTGAGTGAGGCCGGCACCTTTGAGGACCCTCAGCGTCTCTACCACCTGGGCCTCCCCGGCCACGATCTCCTGAGGGTCCGGCAGGAGGTGGCAGCGGCAGCTGTGAGGAGCCCCAGTGGCCTGGAAGTCCACCTGCCCTCATCCACAGCAGGTCAGCGTCGGAAGCAGGGCCTGGCTCAGCACCGAGACGGCACCGCCCCAGCTGGTGCCCCGTCCTTCTCAGAGAGGGAGTTGTCGCAGCCGCCCCCCTTGCTGTCGCCCCAGAATGCCCCCCACATCGCCCTGGGCCCCCACCTCAGGCCCCCCTTCTTGGGGGTGCCCTCGGCCCTGTGCCAGACCCCAGGCTACGGCTTCCTGCCCCCTGCCCAGGCGGAGATGCTCGCCCGGCAGCAGGAGCTCCTGCGGAAGCAGAACCTGGCCCGGCTGGAGATGTCAGCAGAGCTGCTGCGCCAGAAGGAGCTGGAGAGCGCCCACCGGCCGCAGCTGCTGGCACCCGAGGCCGCCCTGCGCCCACCCGACGGTGCCGAGGAGCTGCAGCGGCGCGGGGCCATGCTGGTGCTGAGACACAGCTCCGCGCCGCTGCTGGCCCTGCCTCCCCAGGGACCCCCGGGCCCCGGCCCTCCCACCCCGCCCCGGGAGCCTGCCCGCCGAGCTCCTCGGAAGGGGGGCCCCAGCCCTGCCTCAACCCGGCCCAGTGAGCCCAAGGAGATCACAGGGGCTGGGCTCTGGGCACAAGACGGCTCTGAAGATGAGCCCCCCAAGGACTCAGACGGAGAGGACCCGGAGATGGTGGCTGCTGGGGGCCAGGGCCCCATCCCAGGCCAAGCCCCAACTGGAGGGGCCAGCTCTGAGGGGAAGGGGCTTGCCTCAGGGTCCATGCTGCCCCCTCCACTGCCCCTGGGCCTGCCCTACACTGTCAGCCCCTACTTCCACACAGGCGCCATGGGGGGCCTCTTCATGGAAGGCGAGGAGGCCACAGCGCCCGAGGATGTCAGCAAGTGGACAGTGGACGATGTCTGCAGCTTTGTGGGCGGCCTGTCCGGCTGTGGAGAATATGCACCGGTCTTCAGAGAACAGGGGATTGACGGGGAGACCCTGCCCCTGCTGACAGAGGAACATCTCCTGACCACCATGGGGCTGAAGCTGGGGCCTGCTCTCAAGATCCGGGCCCAGGTGGCCAAGCGCCTGGGCCGAGTCTTCTACATGGCCAGCTTCCCCGTGGCTCTGCCGCTGCAGCCACCAACACTGCGGGCTCCCGAGAGGGAGCTCAACTCAGGGGAGCAGCCGCTGTCCCCAGCACCGGCCCCCTCCCCGTATGGGGGCGCGCAGCCCCCTGCCGGCCGAGCCTCACCCAAGCAGGAAAACGGAACCATGGCTCTGCTCCCAGGGCCCGCGGACCCTTCCCAGCCTCTGTGCTGA

Related Sequences

bmy_10002T0 SequenceType object (3)

Length: 669 aa      View alignments
>bmy_10002T0
MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPPARVLKKELTPSFSASGDSDRSGPACGQRLGLKQEDDPHVRIMKRRVHTHWDVNISFRETSCSQDGDLPTLISSVHRSRHLVMPEHQSRCEFQRGGVEVGLGAAGDLLGKRLGRSPHISSDCPSEKKARSKSPQEALLLPELGPGMAPEDHYRRLVSALSEAGTFEDPQRLYHLGLPGHDLLRVRQEVAAAAVRSPSGLEVHLPSSTAGQRRKQGLAQHRDGTAPAGAPSFSERELSQPPPLLSPQNAPHIALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMLARQQELLRKQNLARLEMSAELLRQKELESAHRPQLLAPEAALRPPDGAEELQRRGAMLVLRHSSAPLLALPPQGPPGPGPPTPPREPARRAPRKGGPSPASTRPSEPKEITGAGLWAQDGSEDEPPKDSDGEDPEMVAAGGQGPIPGQAPTGGASSEGKGLASGSMLPPPLPLGLPYTVSPYFHTGAMGGLFMEGEEATAPEDVSKWTVDDVCSFVGGLSGCGEYAPVFREQGIDGETLPLLTEEHLLTTMGLKLGPALKIRAQVAKRLGRVFYMASFPVALPLQPPTLRAPERELNSGEQPLSPAPAPSPYGGAQPPAGRASPKQENGTMALLPGPADPSQPLC*