Sequence detailsbmy_10005 (Coding sequence)

Part of scaffold_506 (SequenceType object (1))

For more information consult the page for scaffold_506 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLEKHN1ENSTTRG00000003190 (Bottlenosed dolphin)

Gene Details

pleckstrin homology domain containing, family N member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002991, Bottlenosed dolphin)

Protein Percentage 88.39%
cDNA percentage 91.82%
Ka/Ks Ratio 0.56206 (Ka = 0.0631, Ks = 0.1122)

PLEKHN1ENSBTAG00000014537 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019320, Cow)

Protein Percentage 82.4%
cDNA percentage 88.65%
Ka/Ks Ratio 0.37145 (Ka = 0.0931, Ks = 0.2507)

PLEKHN1 (Minke Whale)

Gene Details

pleckstrin homology domain containing, family N member 1

External Links

Gene match (Identifier: BACU018716, Minke Whale)

Protein Percentage 94.87%
cDNA percentage 96.41%
Ka/Ks Ratio 0.42823 (Ka = 0.0289, Ks = 0.0675)

Additional orthologs identified in other species via the OPTIC pipeline.

PLEKHN1 (Human)   Plekhn1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1827 bp    Location:72267..84370   Strand:+
Raw sequence 
>bmy_10005
ATGGGGAACAGCCACTGTGTCCCTCAGGCCCCTAGGAGGCTCCGAGCCTCCTTTTCCAGAAAGCCCTCGCTGAAGGGAAATAGAGAGGACGGCGCCCGGAAGCTGGTTGGCCTGTTTGGCACCGAGGCCAGTCTGGATGGGGACACCACTGCCGACAAGATCTTCCGCTACATCCCTGGGACGAACATCCCGAGCCTGGAGCGCCAGCAAGAAAACCTGGAGCAGCCTTTCCTGAGTGTGTTCAAGGCAGGGCAGCGGAGGGCGCCCGTGAGGAGCCTGGGCAAGGTCGTGCACTACACCAAGGTCCAGCTGCGTTTCCAGCACAGCCAGGACATCAGCGACTGCTATCTGGAGCTCTTCCCCTCCCACCTCTACTTCCAGGCCCATGGTTCCGAAGGACTCATTTTCCAGGGGCTATTACCACTGATGGAGCTGAGTGTCTGCCCGCTCGAGGGATCCAGAGAGCATGCCTTCCAGATCACAGGCCCGCTGCCCGCCCCCCTTCTCGTGCTCTGCCCCAGCCAGGCCGAGCTGGACCGCTGGCTCTACCACCTGGAGAAGCAGATAGCCCTCGTGGGAGGGGTGCCGCGCTGCCACCCAGCACCCCCTCAGGGCCCGCCTGAGAACGAGCTCCCCTGGACTCTGCAGCACAGGCTGACCCCGCTGCGGACGGCATCAGGGCTCCAGGTGGTGGGCACCGCCGTCTGTGCCTCGAGGGTCAAGCTGCAGCATCTGCCCTCACAGGATCAGTGGGACCGGCTCCTGGTCCTGTACCCGACCTCCCTGGCCATCTTCTCCGAGGAAGCAGATGGGCTTTGCTTTAAGGGGGAGCTCCCGCTCAGCGCCATCCACATCAACCTGGAGGAGAGGGGGAAACAGATCCGCTCTTTCCTGATCGAAGGCCGTCTCATCAACACCATCCGTGTGGTGTGTGCCAGCTACGAGGACTATGGCCACTGGCTGCTCTGCCTGCAGACGGTCTGCCGCGGGGACAGGGCCTCCCCACCGCCCGGCCCCGAGAGCTTCCCGGGGCTGCAGGCGCCCCCACAGGTTGTGGGCAGTGGCCGAGGCTCACTCTCCTCTGACGGACGGACCAGCTGGGACTCGGGGTGCCCAGCAGCCGCCTCCAGCCGCTCCACGCCTGAGTCCGCCGCAGGCTGCCCTGCCCGGCCCGCGCCGGAGCAAGCCAGCCCTGGCTGCACCAGCGTCGGTGGGCACAAGGCAAAGCTGAGATGGGCCGGCAGCAACCGATCACCCAGGAGCCAGGCCCAGGGCGAGGGGCCCGGCCCAGCCATCCCACTGCACCTGGACCTGACCAAGTTGAGGCTGGAGGATGGCCCTGAGGCCCCAGACCATTCTCTGGAGACACCGCACTCCCCGCTCTACGCTGACCCCTACACACCACCTGCCACTTCCCACCGCAGGGTCACAGACATCCAGGACCTGGACAAGTTCCTCAGTGCGATGCAGAGCTCGCTCGGACCTGAGCCCTCGAACCCATTCCCCTTGGTCCCCGTGTCCGTGCCTGTCTCTGACCCCAGCTCTGGACTCTCCGGCCCCCACTTGCTGTCCGAGAAGGGAGTCCTGCAGGCCCGAGCCCCTCAGCGGCATCGCGGCTCCATCAAGGGCCGGGGGTCCCGGCCCCCAGGCTCCCCTCAGCTTGTCTCTCCTGCGAGGGAAGTTGCGCCCGAACCCCCGCCACCTCCCCCAGACGGCCGCCCCCCAAGGAGCTACGACAGTGTGTGGGACAAAGCTCTGTCACCTTCCCACCAGCGGTGGCCTCGTGGAGCACCTGAGGCTGAAGGCGGGCTCGTCCAGTGGATCTGA

Related Sequences

bmy_10005T0 SequenceType object (3)

Length: 609 aa      View alignments
>bmy_10005T0
MGNSHCVPQAPRRLRASFSRKPSLKGNREDGARKLVGLFGTEASLDGDTTADKIFRYIPGTNIPSLERQQENLEQPFLSVFKAGQRRAPVRSLGKVVHYTKVQLRFQHSQDISDCYLELFPSHLYFQAHGSEGLIFQGLLPLMELSVCPLEGSREHAFQITGPLPAPLLVLCPSQAELDRWLYHLEKQIALVGGVPRCHPAPPQGPPENELPWTLQHRLTPLRTASGLQVVGTAVCASRVKLQHLPSQDQWDRLLVLYPTSLAIFSEEADGLCFKGELPLSAIHINLEERGKQIRSFLIEGRLINTIRVVCASYEDYGHWLLCLQTVCRGDRASPPPGPESFPGLQAPPQVVGSGRGSLSSDGRTSWDSGCPAAASSRSTPESAAGCPARPAPEQASPGCTSVGGHKAKLRWAGSNRSPRSQAQGEGPGPAIPLHLDLTKLRLEDGPEAPDHSLETPHSPLYADPYTPPATSHRRVTDIQDLDKFLSAMQSSLGPEPSNPFPLVPVSVPVSDPSSGLSGPHLLSEKGVLQARAPQRHRGSIKGRGSRPPGSPQLVSPAREVAPEPPPPPPDGRPPRSYDSVWDKALSPSHQRWPRGAPEAEGGLVQWI*