Part of scaffold_506 (Scaffold)

For more information consult the page for scaffold_506 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFRSF18 ENSBTAG00000015632 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 18 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020759, Cow)

Protein Percentage 80.87%
cDNA percentage 86.67%
Ka/Ks Ratio 0.28907 (Ka = 0.1065, Ks = 0.3683)

TNFRSF18  (Minke Whale)

Gene Details

tumor necrosis factor receptor superfamily, member 18

External Links

Gene match (Identifier: BACU001185, Minke Whale)

Protein Percentage 96.95%
cDNA percentage 98.6%
Ka/Ks Ratio 0.68469 (Ka = 0.0129, Ks = 0.0189)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:288851..286180   Strand:-
>bmy_10016
ATGGGTGCTGCGGGTGCCATGGGGGCGAGGGTCGCGCGCGTGGCCCTGTGCGGCGTCGCGCTGCTCTGCGCGCTGGGCCTGGCCCAGCGCCCCCCCGGGGGTCTGAGCTGCGGCCCCGGCCGCCATCTGCATGGGACGGGGACCAGCGCGCGCTGCTGCCGCTCGTGCACCCCAGGGCCAGGAGCGGGGCGCCCCGGGGAGGGCGGCTCGGCCCCGCTGCTGAGAGGGCTGTTTGTCCCCTGCCCAGCTGAGGGGGTCTGTCCTGAGCTGGGCTGCCAGTGTGTCCAGCCTGAGTTCCACTGTGGAGACCCCCAGTGTAAGAGCTGCAAGTACTACTCCTGTCCGCCTGGCCAGCGGGCGTGGCCTGTAGGGAAGTTCAACTTCGGCTTCGAGTGCATCGACTGTGCTGCGGGGACCTTCTCTGGGGGCCGCGAGGGCCGCTGCAAACCTTGGGCAGAGGCAGCAGCCTTGCTGAGGGGCTGCTCAGGTGGCCGAGGGCTGACCGAGGGCTCTGTGTCCGTGCGTCCCAGCTGCTCCAAGCTTGGGTTTCCCACCGCGTTCCCCGGGAACAAGACGCACGATGCCGTGTGCAGCCCAGGGCTGCCGCCCACGGAGCCGCACGGCCTGCTGACCGCCATCCTCCTCGCCCTGGCCGCCTGCATCCTGGCCCTGACCGTGACCCAGCTCAGCCTGCACATCTGGCAGCTGAGGAGGCAGAGAGTGCGGCCCCCAGAGACGCAGCTGCTCCTAGAGGCCCCGCCACCCCCGCCCGAGGACGCCTGCAGCTGCCCGTTCCCTGAGGAGGAGCGGGGCGAGCCGCTGTCGGAGAACAAGGGCCGCCTGGAGGACCTGTGGGTGTGA

Related Sequences

bmy_10016T0 Protein

Length: 287 aa      View alignments
>bmy_10016T0
MGAAGAMGARVARVALCGVALLCALGLAQRPPGGLSCGPGRHLHGTGTSARCCRSCTPGPGAGRPGEGGSAPLLRGLFVPCPAEGVCPELGCQCVQPEFHCGDPQCKSCKYYSCPPGQRAWPVGKFNFGFECIDCAAGTFSGGREGRCKPWAEAAALLRGCSGGRGLTEGSVSVRPSCSKLGFPTAFPGNKTHDAVCSPGLPPTEPHGLLTAILLALAACILALTVTQLSLHIWQLRRQRVRPPETQLLLEAPPPPPEDACSCPFPEEERGEPLSENKGRLEDLWV*