Part of scaffold_506 (Scaffold)

For more information consult the page for scaffold_506 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDF4 ENSTTRG00000017015 (Bottlenosed dolphin)

Gene Details

stromal cell derived factor 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016131, Bottlenosed dolphin)

Protein Percentage 96.25%
cDNA percentage 97.22%
Ka/Ks Ratio 0.15307 (Ka = 0.0169, Ks = 0.1105)

BT.49428 ENSBTAG00000015642 (Cow)

Gene Details

45 kDa calcium-binding protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020778, Cow)

Protein Percentage 95.0%
cDNA percentage 93.06%
Ka/Ks Ratio 0.04893 (Ka = 0.0231, Ks = 0.4722)

SDF4  (Minke Whale)

Gene Details

stromal cell derived factor 4

External Links

Gene match (Identifier: BACU001183, Minke Whale)

Protein Percentage 78.33%
cDNA percentage 82.78%
Ka/Ks Ratio 0.30348 (Ka = 0.1642, Ks = 0.5411)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 723 bp    Location:311998..299367   Strand:-
>bmy_10018
ATGCAGCACTGGATCATGGAGAAGACGGCCGAGCACTTCCAGGAGGCCATCGCGGAGAGCAGGGCGCACTTCCGTGCCGTGGACCCCGACGGTGACGGCCGTGTGTCCTGGGATGAGTACAAGGTGAGGTTTCTGGCGAGCAAAGGCCACGATGAGAGAGAAGTTGCCGATAAGATAAAGAATAAGTGGGACCTGAACGTCGACGAAGAGACACAGGAAGTCCTGGAGAACCTCAAAGACCGCTGGTATCAGGCGGACAACCCGCCCCCGGACCTGCTGCTGACGGAGAGCGAGTTCCTGTCGTTCCTGCACCCCGAGCACAGCCGCGGCATGCTGCAGTTCATGGTCAAGGAGATCATCCGGGACCTGGACCAGGATGGTGACAAGAAGCTCTCGCTGTCCGAGTTCATTTCTCTGCCCGTGGGCACCGTGGAGAACCAGCAGGGCCAGGACGTGGATGACGGCTGGGTGCGAGACAGGAAGAGAGAGTTCGAGGAGCTGATCGACGCCAACCACGACGGGATCGTGACCATGGCGGAGCTGGAGGACTACATGGACCCCATGAACGAGTTCAGCGCCCTCAACGAGGCCAAGCAGATGATCGCCATCGCCGACGAGAACCAGAACCACTTCCTGGAGCCCGAGGAGGTGCTCAAGTACAGCGAGTTCTTCACGGGCAGCAAGCTGGTGGACTACGCCCGCAGCGTGCACGAGGAGTTCTGA

Related Sequences

bmy_10018T0 Protein

Length: 241 aa      View alignments
>bmy_10018T0
MQHWIMEKTAEHFQEAIAESRAHFRAVDPDGDGRVSWDEYKVRFLASKGHDEREVADKIKNKWDLNVDEETQEVLENLKDRWYQADNPPPDLLLTESEFLSFLHPEHSRGMLQFMVKEIIRDLDQDGDKKLSLSEFISLPVGTVENQQGQDVDDGWVRDRKREFEELIDANHDGIVTMAELEDYMDPMNEFSALNEAKQMIAIADENQNHFLEPEEVLKYSEFFTGSKLVDYARSVHEEF*