Sequence detailsbmy_10023 (Coding sequence)

Part of scaffold_506 (SequenceType object (1))

For more information consult the page for scaffold_506 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCNN1DENSTTRG00000017023 (Bottlenosed dolphin)

Gene Details

sodium channel, non-voltage-gated 1, delta subunit

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016140, Bottlenosed dolphin)

Protein Percentage 61.74%
cDNA percentage 70.5%
Ka/Ks Ratio 0.43655 (Ka = 0.1582, Ks = 0.3624)

SCNN1DENSBTAG00000017674 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023511, Cow)

Protein Percentage 75.0%
cDNA percentage 82.25%
Ka/Ks Ratio 0.20906 (Ka = 0.1431, Ks = 0.6847)

SCNN1D (Minke Whale)

Gene Details

sodium channel, non-voltage-gated 1, delta subunit

External Links

Gene match (Identifier: BACU001180, Minke Whale)

Protein Percentage 84.25%
cDNA percentage 89.37%
Ka/Ks Ratio 0.51999 (Ka = 0.1002, Ks = 0.1926)

Genome Location

Sequence SequenceType object (2)

Length: 1353 bp    Location:349265..352726   Strand:+
Raw sequence 
>bmy_10023
ATGGCCCAAGCAGCTGGTGGGGGGCCGGGGACCCGGACGTGCCCCCAGCTGCCGCCATCGCCACCACCGCCACCGCCCAAGGAGGAGCGTGGGGAGAGGCTGGTGGAGCTGCATGCCTCGTTCAGAGAGCTGGTCACCTTCTTCTGCACCAACGGCGCCATCCACGGCACCATCCGCCTTGTCTGCTCCAGCCAGAACCGCCTCAAGACCGCGTCCTGGGCGCTGCTGCTCGCGGGGGCCCTGGGCCTGCTCTGCTGGCAGTTCAGACTCCTCTTCGAGCAGTACTGGCGCTACCCGGCCATCATGACAGTGTCGTACACTCAGAGCGGAGCACAGGGCAAGCTCTTCCCGTCGGCCACCCTGTGCGACAGGAACCCACACCGGCCGCACCCAGCCCGCCGCCCCCTGCAGGCGCTGGACAACTTTGCCCGGGAGAACATCTACTCCCTGTATGGGTTCAACTTCAGCGACAGCGTGGACGTCCCGGGAGCCGAGGCCCCGGGCCCCGAGCCCACCCTCCAGCTGGACCGCGGGATCCGCCTCCAGAGGCTGAGCCCCCTGCGGGGCCAGAACAGAGTGGGCTGCGAACTGCGTAATAGCGCCGGTGGTGACTGCGTCCAGCAGGCCTACTCCTCCGGCGTGGCGGCCGCCCGGGAGTGGTACCGCTTCCGCTGCGTGAACGTTCTGGCCCTGCCGCCTGCTGCCCACGAGGACAGCCACCACAGCCGCGGCAGACACTTCGTCTTCTCCTGCTGCTACGACGACCAGGACCGCCAGGCCCAACACTTCCAGACCCCCCACCACTCCAGCTACGGCAGCTGCTACACCTTCAACGGTGTCTGGGCCACGCAGCACCCCGGCCTCACCCACGCCGAGTGCCAGCCCGGGCCGGAGGCCGGCATCGCAGTCACGATCCACACGCGTGACCACACGCCCTTCCTGGAGCACCGGGGCTTCAGCATCCGGCCAGGGACGGAGACCACCGTCGGCATCCGAGAGGACGAGGTGCACCGGCTCTGGAGCCCCTGTGGGCACCGCACAGACAGCACGGGGGGCATGACGTGCAGCTACTGTACAACACCTCCTGCACCAGTCGTGGAGGTGCTGGAGCTGCTGCTGGACGCCGCGGCCCTCACCCTGCTGCTGTGCTGCCACCAGCTCCGCGGGGCTCGGGGCCAGCCCAGGGCAGCCACGGGGGTGCCCGCTCCAAGTCAGAGGCCAGCTGGTGGCCGGGTAGCTGCAGGCATGACGTCGAATGCCCGGGGGCCCAGCTCCACCTCCCACGATGTTGCAGGGGCTCCGGCAGGGGTCTTGGCTGGAGGTCAGCCCCGTGTAGGCCCCGGAAACTCCTGA

Related Sequences

bmy_10023T0 SequenceType object (3)

Length: 451 aa      View alignments
>bmy_10023T0
MAQAAGGGPGTRTCPQLPPSPPPPPPKEERGERLVELHASFRELVTFFCTNGAIHGTIRLVCSSQNRLKTASWALLLAGALGLLCWQFRLLFEQYWRYPAIMTVSYTQSGAQGKLFPSATLCDRNPHRPHPARRPLQALDNFARENIYSLYGFNFSDSVDVPGAEAPGPEPTLQLDRGIRLQRLSPLRGQNRVGCELRNSAGGDCVQQAYSSGVAAAREWYRFRCVNVLALPPAAHEDSHHSRGRHFVFSCCYDDQDRQAQHFQTPHHSSYGSCYTFNGVWATQHPGLTHAECQPGPEAGIAVTIHTRDHTPFLEHRGFSIRPGTETTVGIREDEVHRLWSPCGHRTDSTGGMTCSYCTTPPAPVVEVLELLLDAAALTLLLCCHQLRGARGQPRAATGVPAPSQRPAGGRVAAGMTSNARGPSSTSHDVAGAPAGVLAGGQPRVGPGNS*