Part of scaffold_506 (Scaffold)

For more information consult the page for scaffold_506 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPSF3L ENSTTRG00000017031 (Bottlenosed dolphin)

Gene Details

cleavage and polyadenylation specific factor 3-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016145, Bottlenosed dolphin)

Protein Percentage 83.28%
cDNA percentage 83.48%
Ka/Ks Ratio 0.07045 (Ka = 0.0121, Ks = 0.1716)

BT.75461 ENSBTAG00000007620 (Cow)

Gene Details

integrator complex subunit 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010020, Cow)

Protein Percentage 98.53%
cDNA percentage 94.23%
Ka/Ks Ratio 0.00876 (Ka = 0.0059, Ks = 0.6746)

CPSF3L  (Minke Whale)

Gene Details

cleavage and polyadenylation specific factor 3-like

External Links

Gene match (Identifier: BACU001177, Minke Whale)

Protein Percentage 99.71%
cDNA percentage 99.12%
Ka/Ks Ratio 0.01467 (Ka = 0.0011, Ks = 0.076)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1026 bp    Location:385077..371884   Strand:-
>bmy_10025
ATGGACCTGAAGGCCCCCATCTACTTCTCCACGGGCTTGACGGAGAAGGCCAACCACTACTACAAGCTCTTCATCCCCTGGACCAACCAGAAGATCCGGAAGACCTTTGTGCAGAGGAACATGTTTGAATTCAAGCACATCAAGGCCTTCGATCGGGCGTTTGCCGACAGCCCGGGCCCCATGGTCGTGTTTGCCACCCCGGGGATGCTGCATGCTGGCCAGTCCCTACAGATCTTCAGGAAGTGGGCAGGGAACGAGAAGAACATGGTCATCATGCCCGGCTACTGCGTGCAGGGCACCGTGGGCCACAAGATCCTCAGCGGGCAGCGCAAGCTGGAGATGGAGGGGCGGCAGGTGCTGGAGGTCAAGATGCAGGTGGAGTACATGTCCTTCAGCGCCCACGCGGACGCCAAGGGCATCATGCAGCTGGTGGGTCAGGCGGAGCCGGAGAACGTGCTGTTGGTGCACGGCGAGGCCAAGAAGATGGAGTTTCTGAAGCAGAAGATCGAGCAGGAATTCCGGGTCAGCTGCTACATGCCGGCCAACGGCGAGACGGTGACGCTGCCCACGAGCCCCAGCATCCCCGTGGGCGTCTCACTGGGGCTGCTGAAGCGGGAGATGGCGCAGGGGCTACTCCCTGACGCCAAGAAGCCCCGGCTCTTGCATGGCACCCTGATCATGAAGGACAGTAACTTCCGGCTCGTGTCCTCAGAGCAGGCCCTCAAGGAGCTGGGCCTGGCCGAGCACCAGCTGCGCTTCACCTGCCGCGTGCACCTGCACGACACGCGGAAAGAGCAGGAGACAGCCGTGCGCGTGTACAGCCACCTGAAGAGCGTCCTCAAGGACCACTGCGTGCAGCACCTTCCTGACGGCTCCGTGACCGTGGAGTCCATCCTCATTCAGGCCGCTGCCCACTCGGAGGACCCAGGCACCAAGGTGTTGCTGGTCTCCTGGACCTACCAGGACGAGGAGCTGGGAAGCTATCTCACGTCTCTGCTCAAGAAGGGCCTGCCCCAGGCCAGCTGA

Related Sequences

bmy_10025T0 Protein

Length: 342 aa      View alignments
>bmy_10025T0
MDLKAPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPENVLLVHGEAKKMEFLKQKIEQEFRVSCYMPANGETVTLPTSPSIPVGVSLGLLKREMAQGLLPDAKKPRLLHGTLIMKDSNFRLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETAVRVYSHLKSVLKDHCVQHLPDGSVTVESILIQAAAHSEDPGTKVLLVSWTYQDEELGSYLTSLLKKGLPQAS*