Sequence details bmy_10051 (Coding sequence)

Part of scaffold_506 (Scaffold)

For more information consult the page for scaffold_506 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM52 ENSTTRG00000011232 (Bottlenosed dolphin)

Gene Details

transmembrane protein 52

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010649, Bottlenosed dolphin)

Protein Percentage 84.52%
cDNA percentage 90.97%
Ka/Ks Ratio 0.48991 (Ka = 0.0789, Ks = 0.1611)

TMEM52 ENSBTAG00000024509 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033976, Cow)

Protein Percentage 73.86%
cDNA percentage 81.05%
Ka/Ks Ratio 0.35215 (Ka = 0.1767, Ks = 0.5018)

TMEM52  (Minke Whale)

Gene Details

transmembrane protein 52

External Links

Gene match (Identifier: BACU001163, Minke Whale)

Protein Percentage 91.67%
cDNA percentage 95.51%
Ka/Ks Ratio 0.73066 (Ka = 0.0431, Ks = 0.059)

Additional orthologs identified in other species via the OPTIC pipeline.

TMEM52 (Human)   Tmem52 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 471 bp    Location:771180..770413   Strand:-
Raw sequence 
>bmy_10051
GGCGGGTCTGGCTCCTCCCCGCCCAGGCTTATCCTGCTCACTGTCGTCCTGCTGCTGCTGTGTGGGGTCACGGCCAGCTGTGTCCGGTTCTGCTGTCTCCGGAAGCGGGCGCACGCCCAGCCACGCCTGCCATCAGCACCTGAGCCTTGCGACCCGATAGCCATCCCCGCGGACAGTGACAGCCCCATGCACAGCACTGTGTCATCCTACAGCTCCGTGCAGTACCCGCTGGGCATGCGGCTGCCCCTGTCCTTTGGGGAGCTGGACCTCGACTCTATGACCCCTCCCGCCTACAGCCTGTATGCCCCTGAGCTGCCGCCCTCCTACGAAGAGGCCGTCAAGATGGCTAAAACCAGACAGGAAGAGCCACCCCCCTCCCAGGAGCCCAGCCCTCTTCCTGAGGCCTCATGCCTAGAGCCCCCTCCAGGACCCCAGGAGTGGGGCCGCAATGCCCAACACCCCTGGCTGTAG

Related Sequences

bmy_10051T0 Protein

Length: 157 aa      View alignments
>bmy_10051T0
GGSGSSPPRLILLTVVLLLLCGVTASCVRFCCLRKRAHAQPRLPSAPEPCDPIAIPADSDSPMHSTVSSYSSVQYPLGMRLPLSFGELDLDSMTPPAYSLYAPELPPSYEEAVKMAKTRQEEPPPSQEPSPLPEASCLEPPPGPQEWGRNAQHPWL*