Part of scaffold_509 (Scaffold)

For more information consult the page for scaffold_509 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLQ ENSTTRG00000001348 (Bottlenosed dolphin)

Gene Details

polymerase (DNA directed), theta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001268, Bottlenosed dolphin)

Protein Percentage 75.18%
cDNA percentage 76.5%
Ka/Ks Ratio 0.76016 (Ka = 0.0173, Ks = 0.0228)

POLQ ENSBTAG00000001920 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002501, Cow)

Protein Percentage 85.38%
cDNA percentage 91.56%
Ka/Ks Ratio 0.55204 (Ka = 0.0764, Ks = 0.1383)

POLQ  (Minke Whale)

Gene Details

polymerase (DNA directed), theta

External Links

Gene match (Identifier: BACU009289, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 99.02%
Ka/Ks Ratio 0.58788 (Ka = 0.0072, Ks = 0.0123)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4929 bp    Location:299150..347433   Strand:+
>bmy_10101
ATGCGAACTATTTGGGTGACTGGCAGAAAAGATTTAACTGAAAGGGAAGCGGCAACTCTTATAGTAGAAGAAGCCAGAATGATTCTGCAGCAGGACTTAGTTGAAATGGGAGTGCAGTGGAGTCCATATTCCCTTTTAAATTCTGATACACACTCATTGACCTGCAGTGAATCAGAAGTAAAAGAACACAAATTTATACCCCAAACTAAGAGTTCTTATAAAAGATTAACTTCAAAGAAAAAAAGTAACACAATGTTTAGTGGTTCTTTTGTTACTCATTTACCAAATACAGTGCAAGATTTAGATAAAAGTAGAGAGCATACAGATTCCTTTTGTTATAAATTTCAGGATGGGCATCAAGAACGTCAGGTGCATTCCACTTCCAGAGCAAAAAAACGGGCTTCTTTGAATGAGAAGAATATGGAATTTAGAAGTCCAGAGCCATTTGCTAAAAACATATCTTTCTGTGCTGAGGGAAGATATAGCAAAGTATCATTCCCATCACAAACAGAACAGAGTTGTTCAAGGAACAATAAAATATCTAATGATGTTCTTGTGGAATATTTTATCACAGGATCCCAGAATAAAAATGTGACTCATCAAGCCACTAGTGTGGTTAGTGAAAATGGAAGAGTATTAGCTGTTGAATCAGAAAAAAAAAATGAAGCGCTGATACAAAATGATTCAAAAAACCAGCATGTTAATGTGAAACACCATGACACCCATCCAATTAACCAGTGCCTGGAAAAGCAGTTTGATAAACAGACAAATACTTACACCAAACTGAAAAAACCAATAGCAAGACAAATGCCCTATGAGACAGATAGCAGTTATATGAATAGGGACTCAAATGTTGTTATGAAATGTGAAAGTACAAAGTTTAATGCTGAGGAAAATAAATCAAGTAATCTTCAGGTATCAGGAGATAACATAAGCAGCACTGAGATACCCAGTGGAGTACATCTACTAAGTGGAGCATTTGGTAAATCAGGAGGCCAGTGTGAGAATATTCTAAATACCCTTAGAGTACAGGTAAAAACAGATGCTTATGCAGCAGACAGAACTAAAAATAATCATGTTTCTGACTTAGGTTTAGATCTCTGTGATTTTGAAGATAGTTTCTACCTGGATACTCAGTCAGAGAAAATAATTCAACAGATAGCAACTGAAAATGGCAGGCAAGAAGGAGCAAAGGATACCAGCCTGGCAACAGGGATGATGCAGAAGAGCCTAGACAAACAGAGCTCAGTGAGCTCCTTTCAGAAAGAGATTCACATTACTTTTCCAGGTGAACAACATTCACCAGGAATGACAAATCATTTGAAACTTAAGACTGTAGATGCTATGAAACAAAGCACTGATTCACATGGGGTTGATAACCTGACTCCAGAAAGCCCAATTTTTTATTCTCCAATATTAATAGGGGAAAATGACCCATGTTTTAAAGGCAATGAACTTTCTGTTACTGACTCCCAATTAAATAGTTTTCTTCAAGGTTATCAAACACAAGAAGCTATGAAACCAGTTATACCTCTGGTTCCTAAAATGAGAACTCCTACTGATATAGAAGTAGAACGTCTGCCAGTTCCTGAAACAAGTTTGAATTTGAGTGGTAGTTTACTGTTTGACAGTTTCAGTGAAGAGTACCTCGTAGAAGAGCAACCACCTGATGTACAAGCAAAAGAACGCCTTCCTTCTGAAATAACTTCAGTCCATTTTGGTGATTCTCCGTGTCTACAACCAGAGGGCCCAATTAAAAAATCAGATGTGAATGAGAATCAAGATAATCAGCAGCCATTGTCTTGTTTCAGTGATGAGTCTACTGTATTTTCAGAAATGGATTCTGCTCAGATGGTTGAAGCTTTGGACAGTGTAGACGTATTTCCTGTCCAAGAGAAACATAATACTGCAGGATCTCTTAGAGTATTAGAACTGAGTGATCCAGTGATTGTGGGTAATGATTATTCCCAAAGAGAAGTAATTGGAGGAGATAAAGATAAAAGGTCTCAAAAATCCAAATTAACTGGGACAAGGCAAGATAATTCATTCATATGGTCAGGGGCATCATTTGATTTAAGTCCAGGACTGCAAAGGATTTTAGATAATGTGTCCAGTCCTCTAGAAAATGAAAAGCTAAAATTAACCATTACAGACTTGCTCRGTTTGAAAGGAAAAAATACAGAGGTAAATGACAAACAAGAAATGATTTCAAATTTGGAGACAAATCAAGTGCAAGGAATTCCATTTTCCCCTAATGTGTTAAAAGRCARTATTGACGCACTAGAGAACAATGTCATTCATGGTGAAACCTCCTCCCTSTTGCCTTGTAAAGAAAACTGTATAGTTGATGATAATGGACTCATTCCTCCTATACCATCTGCTTCTAAGTTGTCATTTCCAGGTTTTCTTGGAACATCTTCTGTAAAACTTAAGAAAATTAGTAGTGGTTTACAACTTGGTGAAAGTTATTCATTTGGCTCACCTTCAGATAATAAAAACCGCGATTTAAGTCCAGAGACTAGAAATGGTTTCAAAGATGACAGTCCTATTAGAGACACAAGTTTTTCACCGCAGTTACCACAGGATGGATCGCAGTTAACTCTAGCCTCATGCAGTCCAGAAAGTTTGGCCATAATTGACGTAGCGAGTGACCAAACTCTCTTTCAAACATTCATGAAGGAGTGGCAAAACAAAACTCGATTTTCCATCTCACTGGCTTGTGAAAAGATCAGTAATTTGACATCTTCTAAAAGCGCTACTATTGGTGGTAGGTTTAAGCAAGTTAGTTCCTCTCAGGAAAGCCCTATTGGAGATGATGGAATTCCTGTTAAAGGTTGTGATGGCATCTTGGTGGTTGGACTGGCAGTATGCTGGGGTGGAAGAGATGCTTACTATTTTTCATTGCAGAAGGAACAAAAGCATTCTGAAATTAGTGCCAGTTTGGCCCCACCTTCTCTGGATCCAAGCCTGACTGTGAAAGACAGAATGCGGCACCTTCAATCTTGCTTTCAAAAGGAATCTGATAAAGAACGTTCTGTTATCATCTATGACTTCATCCAGAGCTATAAAATTCTTCTTCTGTCTTGTGGCATCTCCCTGGAACAAAGTTTTGAAGATCCTAAGGTGGCATGCTGGTTACTAGATCCAGATTCCAAGGAGCCGACTCTTCATGGCATAGTTTCCCGTTTTCTTCCTCATGAGCTTCCACTCCTGGAAGAGATAGAGACTGGCCAAGGAACTCAAAGCCTAGGGCTGAATGTCACCACTGAGCATTCTGGGCGATACAGAGCATCTGTAGAGTCCATTCTCATCTTCAGCTCTATGAGTCAACTTAATTCTTTGTTGAAGAAGGAAAACCTTCAAGATGTCTTCTGTAAAGTGGAAATGCCCTCCCAGTACTGCTTGGCCTTGCTAGAACTAAATGGAATCGGCTTTAGTACCGCAGAATGTGAAAGTCAGAAACACATAATGCAAGCCAAACTGGATGCAATTGAGACTCAGGCCTATCAACTAGCTGGCCATAGTTTTTCTTTCACCAGTTCAGATGACATCGCTGAGGTTGTTTTATTTTTGGAATTGAAGTTGCCACCAAATGGAGAGAGAAAACACCAAGGCAGCAAGAAAACTTTGGGTTCTACCAGAAGAGGGAATGACGATGGATGGAAGCTAAGGCTGGGAAAACAGTTCAGCACTAGTAAGGATGCTTTAAATAAATTAAGGGCATTACATCCTTTACCAGGCTTGATATTAGAGTGGAGAAGAATCACTAATGCTATTACCAAAGTGGTCTTTCCCCTGCAGCGGGAAAAACGTCTGAATCCTTTCCTTGGAATGGAAAGAATCTATCCTGTATCACAATCACACACTGCTACAGGACGAATAACCTTTATAGAACCAAATATTCAGAATGTACCAAGAGATTTTGAGATCAAAATGCCAACACTAGTGGAGGAAAGCCCACCTTCCCAAGCCCTAGGCAAAGGCCTACTTCCTACCGGCAGAGGAGGAAAAAAGAAGGGTTGTGGCCTGAACCCCAGGCATCAGGCAAAGATGGAGGAGAGAGCCTCAGACAAAGGAATGCCATTTTCAGTTAGCATGAGACATGCCTTTGTGCCTTTCCCAGGTGGTTTAATATTAGCTGCTGATTACTCTCAACTTGAGCTGAGGATCTTGGCTCATTTATCCCACGATCATCGTCTCATTCAAGTACTAAACACTGGAGCTGATGTTTTCAGGAGTATTGCAGCTGAATGGAAGATGATTGAGCCAGAGTCTGTTGGGGATGATCTGAGGCAACAAGCAAAACAGATTTGCTATGGAATCATTTATGGAATGGGAGCTAAATCTTTGGGAGAGCAGATGGGTATTAAAGAAAATGATGCTGCTTTTTACATTGACTCCTTCAAATCCAGATAYACCGGGATTAATCATTTCATGAGAGAGACAGTGAAGAATTGTAAAAGAGATGGATTTGTTCAGACCATTTTGGGAAGGCATAGATATTTACCAGGAATCAAAGACAGCAACCCTTATCACAAAGCTCACGCTGAGCGTCAGGCTATCAACACAAGAGTCCAAGGTTCGGCGGCTGATATTGTCAAAATAGCCACAGTTAATATTCAGAAGCAATTAGAAACCTTCTACTCAACCTTCAAATCCCATGGTCATCGGGAGAGTATGCTCCAAAATGACAGAACAGGATTGTTACCAAAGAGAAGACTGCAAGGGATGTTCTGTCCCATCAGAGGAGGCTTCTTCATCCTTCAACTCCATGATGAACTCTTATATGAAGTGGCAGAAGAGGATGTTGTTCAGGTAGCTCAGATTGTCAAGAATGAAATGGAAAGTGCCATAAAACTCTCTGTGAAACTGAAAGTGAAAGTGAAAATAGGTGCCAGCTGGGGAGAGCTGAAGGACTTTGATGTGTGA

Related Sequences

bmy_10101T0 Protein

Length: 1643 aa      View alignments
>bmy_10101T0
MRTIWVTGRKDLTEREAATLIVEEARMILQQDLVEMGVQWSPYSLLNSDTHSLTCSESEVKEHKFIPQTKSSYKRLTSKKKSNTMFSGSFVTHLPNTVQDLDKSREHTDSFCYKFQDGHQERQVHSTSRAKKRASLNEKNMEFRSPEPFAKNISFCAEGRYSKVSFPSQTEQSCSRNNKISNDVLVEYFITGSQNKNVTHQATSVVSENGRVLAVESEKKNEALIQNDSKNQHVNVKHHDTHPINQCLEKQFDKQTNTYTKLKKPIARQMPYETDSSYMNRDSNVVMKCESTKFNAEENKSSNLQVSGDNISSTEIPSGVHLLSGAFGKSGGQCENILNTLRVQVKTDAYAADRTKNNHVSDLGLDLCDFEDSFYLDTQSEKIIQQIATENGRQEGAKDTSLATGMMQKSLDKQSSVSSFQKEIHITFPGEQHSPGMTNHLKLKTVDAMKQSTDSHGVDNLTPESPIFYSPILIGENDPCFKGNELSVTDSQLNSFLQGYQTQEAMKPVIPLVPKMRTPTDIEVERLPVPETSLNLSGSLLFDSFSEEYLVEEQPPDVQAKERLPSEITSVHFGDSPCLQPEGPIKKSDVNENQDNQQPLSCFSDESTVFSEMDSAQMVEALDSVDVFPVQEKHNTAGSLRVLELSDPVIVGNDYSQREVIGGDKDKRSQKSKLTGTRQDNSFIWSGASFDLSPGLQRILDNVSSPLENEKLKLTITDLLXLKGKNTEVNDKQEMISNLETNQVQGIPFSPNVLKXXIDALENNVIHGETSSLLPCKENCIVDDNGLIPPIPSASKLSFPGFLGTSSVKLKKISSGLQLGESYSFGSPSDNKNRDLSPETRNGFKDDSPIRDTSFSPQLPQDGSQLTLASCSPESLAIIDVASDQTLFQTFMKEWQNKTRFSISLACEKISNLTSSKSATIGGRFKQVSSSQESPIGDDGIPVKGCDGILVVGLAVCWGGRDAYYFSLQKEQKHSEISASLAPPSLDPSLTVKDRMRHLQSCFQKESDKERSVIIYDFIQSYKILLLSCGISLEQSFEDPKVACWLLDPDSKEPTLHGIVSRFLPHELPLLEEIETGQGTQSLGLNVTTEHSGRYRASVESILIFSSMSQLNSLLKKENLQDVFCKVEMPSQYCLALLELNGIGFSTAECESQKHIMQAKLDAIETQAYQLAGHSFSFTSSDDIAEVVLFLELKLPPNGERKHQGSKKTLGSTRRGNDDGWKLRLGKQFSTSKDALNKLRALHPLPGLILEWRRITNAITKVVFPLQREKRLNPFLGMERIYPVSQSHTATGRITFIEPNIQNVPRDFEIKMPTLVEESPPSQALGKGLLPTGRGGKKKGCGLNPRHQAKMEERASDKGMPFSVSMRHAFVPFPGGLILAADYSQLELRILAHLSHDHRLIQVLNTGADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGMGAKSLGEQMGIKENDAAFYIDSFKSRYTGINHFMRETVKNCKRDGFVQTILGRHRYLPGIKDSNPYHKAHAERQAINTRVQGSAADIVKIATVNIQKQLETFYSTFKSHGHRESMLQNDRTGLLPKRRLQGMFCPIRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKLKVKVKIGASWGELKDFDV*