Sequence detailsbmy_10138 (Coding sequence)

Part of scaffold_517 (SequenceType object (1))

For more information consult the page for scaffold_517 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP48ENSTTRG00000002002 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 48

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001881, Bottlenosed dolphin)

Protein Percentage 96.53%
cDNA percentage 96.26%
Ka/Ks Ratio 0.16962 (Ka = 0.0126, Ks = 0.0745)

USP48ENSBTAG00000006940 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009110, Cow)

Protein Percentage 96.64%
cDNA percentage 93.2%
Ka/Ks Ratio 0.07628 (Ka = 0.0196, Ks = 0.2568)

Additional orthologs identified in other species via the OPTIC pipeline.

USP48 (Human)   Usp48 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2946 bp    Location:414676..463307   Strand:+
Raw sequence 
>bmy_10138
ATGGTATTTTTTAATCATACAATATTTTTTCATAGACGAAACTGCAAAGGAAATCCGAATTGCTTGGTTGGGATTGGTGAGCACATTTGGTTAGGAGAAATAGATGAAAATAGTTTTCATAACATTGACGACCCCAACTGTGAGAGGAGAAAAAAGAACTCATTTGTGGGCCTCACTAACCTTGGAGCTACTTGTTATGTCAACACATTTCTTCAAGTGTGGTTTCTTAACCTGGAGCTTCGGCAGGCGCTCTACTTATGTCCAAGCACCTGTAGTGACTACATGATGGGAGATGGTATCCAAGAAGAGAAAGATTATGAGCCTCAAACAATTTGTGAGCATCTCCAGTACTTATTTGCCTTGTTGCAAAACAGTAATAGGCGATACATTGATCCATCGGGATTTGTTAAAGCTTTGGGCTTGGACACAGGGCAGCAGCAGGATGCCCAAGAATTTTCAAAGCTCTTTATGTCTCTTTTGGAAGATACTTTGTCTAAACAAAAGAATCCCGATGTGAGGAACATTGTGCAACAGCAGTTCTGTGGGGAATATGCTTATGTAACTGTGTGCAATCAGTGTGGCAGAGAATCTAAGCTTTTATCAAAGTTTTATGAACTGGAGTTAAATATCCAAGGCCACAAACAGTTAACAGATTGTATCTCAGAATTTTTGAAGGAAGAAAAATTAGAAGGAGACAATCGATACTTTTGTGAAAACTGTCAAAGCAAACAGAATGCAACAAGGAAGATCCGACTCCTTAGTCTTCCTTGTACTCTGAACTTACAGCTAATGCGTTTTGTCTTTGACAGGCAAACTGGACATAAGAAAAAGCTGAATACCTACATTGGCTTCTCAGAAATTTTGGATATGGAGCCTTATGTGGAACACAAAGGTGGGTCCTATGTGTATGAACTCAGTGCAGTCCTCATACACAGAGGAGTGAGTGCTTATTCCGGTCACTACATTGCCCATGTGAAAGATCCACAGTCTGGTGAATGGTATAAGTTTAATGACGAAGACATAGAAAAGATGGAGGGGAAGAAATTACAACTAGGGATTGAGGAAGATCTAGCAGAACCTTCTAAATCCCAGACACGTAAACCCAAGTGTGGCAAAGGAACTCACTGCTCTCGAAATGCGTACATGTTGGTTTATAGACTACAAACTCAAGAAAAACCCAACACGACTATTCAGGTACCAGCCTTTCTTCAAGAGCTGGTAGATCGGGATAATTCCAAATTTGAGGAGTGGTGTATTGAAATGGCCGAGATGCGTAAGCAAAGTGTGGATAAAGGAAAAGCAAAGCATGAAGAAGTTAAGGAGCTGTACCAAAGGTTACCTGCTGGAGCTGAGCCCTATGAATTTGTCTCTCTGGAATGGCTGCAGAAGTGGTTGGATGAATCGACGCCCACCAAGCCTATTGATAATCACGCTTGCCTGTGTTCCCACGACAAGCTTCATCCCGATAAAATATCGATTATGAAGAGAATATCTGAATATGCGGCTGACATTTTCTATAGTAGATATGGAGGGGGACCAAGACTAACTGTGAAAGCCCTGTGTAAGGAATGCGTAGTAGAACGTTGTCGTGTGTTGCGTCTGAAGAACCAACTAAATGAAGATTATAAAACTGTAAATAATCTGCTCAAAGCAACAGTAAAGGGCAGTGATGGATTTTGGGTAGGGAAATCCTCCTTACGCAGTTGGCGCCAGCTAGCTCTTGAACAGCTGGATGAGCAAGATGGCGATGCAGACCAAAGCAGTGGGAAAATGAATGGCAACACCTTGAATAAAGATGAATCAAAGGAAGAAAGAAAAGAGGAGGAGGAAGAATTAAATTTTAATGAAGACATTCTGTGCCCACATGGGGAGTTATGCATATCTGAAAATGAAAGAAGGCTTGTTTCTAAAGAGGCTTGGAGCAAACTGCAGCAGTACTTCCCAAAGGCTCCCGAGTTTCCAAGTTACAAAGAATGCTGTTCACAGTGCAAGATTTTAGAAAGAGAAGGAGAAGAAAATGAAGCCTTGCATAAGATGATTGCAAATGAGCAAAAGACTTCTCTTCCAAATTTGTTCCAGGACAAAAACAGACCGTGTCTCAGTAACTGGCCAGAGGACACGGATGTCCTCTACATTGTGTCACAGTTCTTTGTAGAAGAATGGCGAAAATTTGTTAGGAAACCTACAAGGTGTAGTCCTGTGTCATCGGTTGGAAACAGTGCTCTTCTGTGTCCTCACGGGGGACTCATGTTTACATTTGCTTCCATGACCAAAGAAGATTCTAAACTTATAGCTCTCATATGGCCCAGTGAGTGGCAAATGATACAAAAGCTCTTTGTCGTGGATCATGTAATTAAAATCATGAGAACTGAAGGAGGAGATGCAGACCCTTCAGAAACACAGTATATTTCTGAGCCTAAACTCTGTCCTGAATGTAGAGAAGGGTTATTGTGTCAACAGCAGAGGGACCTGCGTGAATACACTCAAGCCACCATCTACGTCCATAAAGTCGTGGATAATAAGAAGGTGATGAAGGATTCAGCTCCAGAGCTAAATGTGAGTAGTTCTGAAACAGAGGAGGATAAGGAAGAAGCTAAACCGGATGGAGAAAAAGATCCAGATTTTAATCAAAGCAACGGAGGAACAAAGCGGCAAAAGATATCCCATCAAAATTATATAGCCTACCAAAAGCAAGTTATTCGGCGGAGTATGCGACATAGAAAAGTTCGTGGTGAAAAAGCTCTTCTTGTTTCTGCTAATCAAACATTAAAAGAATTGAAAATTCAGATCATGCATGCATTTTCAGTTGCTCCTTTTGACCAGAATCTGTCAATTGATGGAAAGATTTTAAGTGATGACTGTGCCACCCTCGGAACCCTTGGCGTCATTCCTGAATCTGTCATTTTGTTAAAGGTARGTAACAGCTCTTTACCTGAGGGATTCTAG

Related Sequences

bmy_10138T0 SequenceType object (3)

Length: 982 aa      View alignments
>bmy_10138T0
MVFFNHTIFFHRRNCKGNPNCLVGIGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYMMGDGIQEEKDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFSEILDMEPYVEHKGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTIQVPAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPAGAEPYEFVSLEWLQKWLDESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRVLRLKNQLNEDYKTVNNLLKATVKGSDGFWVGKSSLRSWRQLALEQLDEQDGDADQSSGKMNGNTLNKDESKEERKEEEEELNFNEDILCPHGELCISENERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREGEENEALHKMIANEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVRKPTRCSPVSSVGNSALLCPHGGLMFTFASMTKEDSKLIALIWPSEWQMIQKLFVVDHVIKIMRTEGGDADPSETQYISEPKLCPECREGLLCQQQRDLREYTQATIYVHKVVDNKKVMKDSAPELNVSSSETEEDKEEAKPDGEKDPDFNQSNGGTKRQKISHQNYIAYQKQVIRRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSIDGKILSDDCATLGTLGVIPESVILLKVXNSSLPEGF*