Part of scaffold_525 (Scaffold)

For more information consult the page for scaffold_525 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFNK ENSTTRG00000005482 (Bottlenosed dolphin)

Gene Details

interferon, kappa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005165, Bottlenosed dolphin)

Protein Percentage 78.74%
cDNA percentage 84.22%
Ka/Ks Ratio 0.41531 (Ka = 0.1354, Ks = 0.3261)

IFNK ENSBTAG00000006853 (Cow)

Gene Details

interferon kappa

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008998, Cow)

Protein Percentage 67.79%
cDNA percentage 78.04%
Ka/Ks Ratio 0.57728 (Ka = 0.2282, Ks = 0.3953)

IFNK  (Minke Whale)

Gene Details

interferon, kappa

External Links

Gene match (Identifier: BACU006639, Minke Whale)

Protein Percentage 81.73%
cDNA percentage 87.18%
Ka/Ks Ratio 0.59552 (Ka = 0.1189, Ks = 0.1997)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 642 bp    Location:277463..275663   Strand:-
>bmy_10143
ATGAGCGCCAAGCCTGATGTGATTCGAAAGTRTACGTGGCCAGTGTGCCTCGTGGGTCTGTTCGTCACCGGCATCCTCTCTCTGGACTGTAGCTTGCTGGATGTTCACCTGAGRAGAGTCACCTGGCAAAACYTGAGCCTTCTGAGCASGATGAGCAAGTCATTTCCTATAGAGTGTCTAAGGGAAAGCAAGGCTTTTGAGTTGCCCCAAGAGATCCTCTCACACACCCACCCTCTGACGAGGGACATCAAGGAGGCCTTCTATGAAATGTCCAGACAGGCCTTCCACATCTTCATTCAAGACACCTTCAAATCCACTTGGGAAGAGAAACACCTGAGACAAGTCCAAATCGGACTTGATCAACAGCTGCAATACCTGGAACAATGCTTGGAAGAAGAGGAGGAGGAAAACGAAGACATGAGAGAGATGGCAGAGGATGAGTGGACACAGTCAGGAGCYCCGGTCCCCCAGCTGAGCAACCTAGAGCTGAGGAGATATTTCAACAGGATAGACAGAACCATCTACCTTCAAGCAAGAATTAACAGAGATTGTGGCTACCCAAATGCATCAAAGAGGGTGAAATGTACCCGGTTCAGCTCTTGGAAGGCTTCTCCTGCTATTACTTTAACAGCACGCTGCTAA

Related Sequences

bmy_10143T0 Protein

Length: 214 aa      View alignments
>bmy_10143T0
MSAKPDVIRKXTWPVCLVGLFVTGILSLDCSLLDVHLRRVTWQNLSLLSXMSKSFPIECLRESKAFELPQEILSHTHPLTRDIKEAFYEMSRQAFHIFIQDTFKSTWEEKHLRQVQIGLDQQLQYLEQCLEEEEEENEDMREMAEDEWTQSGAPVPQLSNLELRRYFNRIDRTIYLQARINRDCGYPNASKRVKCTRFSSWKASPAITLTARC*