Sequence details bmy_10180 (Coding sequence)

Part of scaffold_513 (Scaffold)

For more information consult the page for scaffold_513 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VRTN ENSBTAG00000005774 (Cow)

Gene Details

vertnin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007588, Cow)

Protein Percentage 90.83%
cDNA percentage 90.11%
Ka/Ks Ratio 0.09097 (Ka = 0.0432, Ks = 0.4752)

Additional orthologs identified in other species via the OPTIC pipeline.

VRTN (Human)   Vrtn (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2142 bp    Location:1072590..1070449   Strand:-
Raw sequence 
>bmy_10180
ATGACATCCCGGGAGCAGCTGGTGCAGCAGGTGCTGCAGGAACTGCAGGAGGCAGTGGAGTCCGAGGGCCTGGAGGGTCTCGTTGGTGCTGCTCTGGAGGCCAAGCAGGTCCTGTCTTCCTTCGCTCTCCCCACCGGCCGGGAGGGAGGCCCCGGCCCCCAGGTGCTGGAGGTGGACTCGGTGGCCCTGAGCCTGTACCCAGAGGATGCTCCCCGGAACATGTTGCCGCTGGTGTGCAAGGGCGAGGGCAGCCTGCTGTTCGAGGCGGCCAGCATGCTGCTGTGGGGCGACGCGGGCCTCAGCCTGGAGCTGCGGGCCCGCACGGTGGTGGAGATGCTGCTGCACCGGCACTACTACCTCCAGGGCATGATTGACTCCAAGGTGATGCTGCAGGCCGTGCGCTATTCCCTGTGCTCTGAGGAGTCCCCGGAGATGACCAGCCTGCCGTCCGCCACGCTAGAGGCCATCTTTGATGCGGACGTCAAGGCCACCTGCTTTCCTAGCAGCTTCTCCAACGTGTGGCACTTGTACGCCCTCGCCTCCGTCCTTCAGCGCAACATCTACTCCATCTACCCCTTGCGCAACCTCAAGATCCGGCCATACTTCAACCGCGTCATCCGGCCCCGCCGCTGCGACCACATGCCCGCCACGCTGCACATCATGTGGGCTGGCCAGCCCCTCACGAGCCAGCTCTTCCGCCACCAGTACTTTGCCCCCGTGGTGGGGCTGGAGGAGGTGGAGGCTGAAGGTGCCAGCCCCGGCCTGGCCCCGACTCCCGCTGCCCTGGCTCCGCTGCCGCCGCCCGCCAAGACCCTGGAGCTGCTGAACCGGGAACCTGGCCTCAGCTACTCCCACCTCGGTGAGCGCTACAGCGTCACCAAGAGCACCTTCTACCGCTGGCGGCGGCAGTCCCAGGAGCACCGGCAGAAGGTGGCCACCCGCTTCTCGGCCAAGCACTTCCTGCAGGACAGCTTCCACCGCGGGGGTGTCGTGCCRCTGCAGCAGTTCCTCCAGAGGTTCCCCGAGATCTCCCGCTCCACCTATTATGCCTGGAAGCACGAGCTCCTGGGCTCTGGCGCCTGCCGGGCCCTGGCCCCCAAGGAGGAGCTGGCCATGGAGGAGCTGGAGAAGCTGCCGGCGGAGCAGGTTGCCAAGGGGCTGGGATGCTCCTCGTCGGCCATGTCAAGCCCTGGAATGGTCTTAATGCAGCGGGCCAAGTTGTACCTGGAGCACTGCATCTCCCTGAATACGCTGGTACCCTATCGCTGCTTCAAACGCAGGTTCCCCGGCATCTCCCGGTCCACCTACTACAATTGGCGCCGAAAGGCTCTCCGAAGGAACCCCAGCTTCAAGCCTGCACCAGCCCTCTCGGTAGCCGGGGCTTCCCAGCCAGCATCTGTTGGGGAAAAGGCCTTGCTCCCTTGGAAGGGTGAGGCAGGAGAAGGGGCAGGGAAAGCAACGGGTGGGGGGTCACCTGCCCCCCGGGAGTTCCTACCCCTGAGGATGCCCCTGTCCCGTTGGCAGAGGCGCCTGCGCAGGGCAGCCCGCAAGCAGGTGCTCAGTGGGCACCTCCCCTTCTGTCGCTTCCGCCTCCGCTACCCGAGCCTGTCTCCCTCTACCTTTTGGGTCTGGAAGAGTCTTGCCCGGGGCTGGCCCAGAAGTCTGTCCAAGCTCCAGATACAGGCCCCCAGCTTGGGCAAAGGGGGCATGAAGGAGGCGGAGGAGAAACGGGAGAAAGAAGTTGGCAGGAATGTGACAGCTGCCATGGTCCCACCTGCAGGGACCCTGCAGATGGCGGCTTCTCCAGGAGAGGATCCAGGGAAGGCCCAGGGAGGGCCTTCCAGAGAGGGGGCCCTGCAAGAGGGGGCCACGGCCCAGGGCCGGCCCCCCAGTGGGTCCCTGTCCAGCCACCCTGTGGTGGCAGCAGCGGCGGGTGGCAGGGACGGCCAGGTGCTGGTGATGGACATGCTCGCCACCACGAAGTTCAAGGCCCAGGCCAAGCTGTTCCTGCAGAAGCGCTTCCAGTCCAAGAGCTTCCCCTCCTACAAGGAGTTCAGTGCCCTCTTCCCCCTCACCGCCCGCTCTACCTACTACATGTGGAAGCGTGCCCTCTACGATGGCCTCACCCTGGTGGATGGCTGA

Related Sequences

bmy_10180T0 Protein

Length: 714 aa      View alignments
>bmy_10180T0
MTSREQLVQQVLQELQEAVESEGLEGLVGAALEAKQVLSSFALPTGREGGPGPQVLEVDSVALSLYPEDAPRNMLPLVCKGEGSLLFEAASMLLWGDAGLSLELRARTVVEMLLHRHYYLQGMIDSKVMLQAVRYSLCSEESPEMTSLPSATLEAIFDADVKATCFPSSFSNVWHLYALASVLQRNIYSIYPLRNLKIRPYFNRVIRPRRCDHMPATLHIMWAGQPLTSQLFRHQYFAPVVGLEEVEAEGASPGLAPTPAALAPLPPPAKTLELLNREPGLSYSHLGERYSVTKSTFYRWRRQSQEHRQKVATRFSAKHFLQDSFHRGGVVPLQQFLQRFPEISRSTYYAWKHELLGSGACRALAPKEELAMEELEKLPAEQVAKGLGCSSSAMSSPGMVLMQRAKLYLEHCISLNTLVPYRCFKRRFPGISRSTYYNWRRKALRRNPSFKPAPALSVAGASQPASVGEKALLPWKGEAGEGAGKATGGGSPAPREFLPLRMPLSRWQRRLRRAARKQVLSGHLPFCRFRLRYPSLSPSTFWVWKSLARGWPRSLSKLQIQAPSLGKGGMKEAEEKREKEVGRNVTAAMVPPAGTLQMAASPGEDPGKAQGGPSREGALQEGATAQGRPPSGSLSSHPVVAAAAGGRDGQVLVMDMLATTKFKAQAKLFLQKRFQSKSFPSYKEFSALFPLTARSTYYMWKRALYDGLTLVDG*