Part of scaffold_510 (Scaffold)

For more information consult the page for scaffold_510 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTSW ENSTTRG00000016934 (Bottlenosed dolphin)

Gene Details

cathepsin W

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016055, Bottlenosed dolphin)

Protein Percentage 54.55%
cDNA percentage 63.26%
Ka/Ks Ratio 0.39244 (Ka = 0.4412, Ks = 1.1243)

CTSW ENSBTAG00000020773 (Cow)

Gene Details

cathepsin W precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027681, Cow)

Protein Percentage 63.54%
cDNA percentage 71.3%
Ka/Ks Ratio 0.37967 (Ka = 0.2971, Ks = 0.7825)

CTSW  (Minke Whale)

Gene Details

cathepsin W

External Links

Gene match (Identifier: BACU003489, Minke Whale)

Protein Percentage 73.26%
cDNA percentage 79.28%
Ka/Ks Ratio 0.46928 (Ka = 0.2083, Ks = 0.4439)

Genome Location

Sequence Coding sequence

Length: 867 bp    Location:1046338..1048860   Strand:+
>bmy_10238
ATGCGGCCTGGCCCAATCCAGCCCTGGTGGCGGGAGGGGGAGGAGAGGGGCAAGGCCTGCATTCCCTACCCCCACCCCCATCCTTCTACCACTAGCAAAACTGCAACTGTTGCTGGGCCATGGCAGCAGCGGGCAACATCGAGGCCCTGTGGGCCATCAAATACCATCAGTCTCTGGAAGTCTCCGTGCAAGGTATGGCTGGGGGAGGGGACCTGTGTGACTGAGGCGGGGATGCCTGAGGCCCGGGCACCCACACTGTCCCTGCTTGCACCAGAGCTGCTCGACTGTGACCGCTGTGGGAATGGCTGCAAGGGCGGCTTCGTCTGGGACGCGTTCATAACTGTCCTCAACACCAGTGGCCTGGCCAGTGACAAGGACTACCCATTCAAGGGGAACGGCAAAACCCACAGATGCCTGGCTAAGAAGTATAAGAAGGTGGCCTGGATCCAGGATTTCATCATGCTGCAGCCCTGCGAGCAGAGCATCGCCAGGTACTTAGCCACCCAAGGCCCCATCACTGTGACCATCAACATGAAGCTATTGCAGCAATACCAGAAGGGTGTGATCAAGGCCACACCTACCACCTGTGACCCCCAGCTTGTGGATCATTCTGTCCTGCTGGTGGGTTTTGGTAAAAGCAAGTCGGTGGAGGGGAGGCAGGCAGAGGCGATCTCATCCCGGTCTCATCCTCATCCTCGCTACTCCATCCCATACTGGATCCTGAAGAACTCCTGGGGGGCCAACTGGGGTGAGGAGGGCTATTTCCGGCTGCACCGAGGGAGTAATACCTGCGGCATCACCAAGTACCCGTTCACTGCCAGAGTGGACAAACCCGTTAAGAAGCACCAAGTCTCCTGCCCTCCCTAA

Related Sequences

bmy_10238T0 Protein

Length: 289 aa      View alignments
>bmy_10238T0
MRPGPIQPWWREGEERGKACIPYPHPHPSTTSKTATVAGPWQQRATSRPCGPSNTISLWKSPCKVWLGEGTCVTEAGMPEARAPTLSLLAPELLDCDRCGNGCKGGFVWDAFITVLNTSGLASDKDYPFKGNGKTHRCLAKKYKKVAWIQDFIMLQPCEQSIARYLATQGPITVTINMKLLQQYQKGVIKATPTTCDPQLVDHSVLLVGFGKSKSVEGRQAEAISSRSHPHPRYSIPYWILKNSWGANWGEEGYFRLHRGSNTCGITKYPFTARVDKPVKKHQVSCPP*