Sequence details bmy_10266 (Coding sequence)

Part of scaffold_520 (Scaffold)

For more information consult the page for scaffold_520 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TDP2 ENSTTRG00000016376 (Bottlenosed dolphin)

Gene Details

tyrosyl-DNA phosphodiesterase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015520, Bottlenosed dolphin)

Protein Percentage 95.3%
cDNA percentage 97.05%
Ka/Ks Ratio 0.41301 (Ka = 0.0227, Ks = 0.0549)

TDP2 ENSBTAG00000000365 (Cow)

Gene Details

Tyrosyl-DNA phosphodiesterase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000472, Cow)

Protein Percentage 89.5%
cDNA percentage 92.82%
Ka/Ks Ratio 0.30944 (Ka = 0.0508, Ks = 0.164)

TDP2  (Minke Whale)

Gene Details

tyrosyl-DNA phosphodiesterase 2

External Links

Gene match (Identifier: BACU017602, Minke Whale)

Protein Percentage 97.24%
cDNA percentage 98.16%
Ka/Ks Ratio 0.44674 (Ka = 0.0142, Ks = 0.0317)

Additional orthologs identified in other species via the OPTIC pipeline.

TDP2 (Human)   Tdp2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1098 bp    Location:645100..658026   Strand:+
Raw sequence 
>bmy_10266
ATGGAGCGGAAGGGCGGTCCGGACGGTGCCCCGGAGGCTGAGCGGGAGGAGGGAGAGCCCGAGGTGAAGAAGCGGAGACTTCTGTGTGTGGAGTTTGCCTCGGTCGCGAGTTGCGACGCCGCCGTGGCTCAGTGCTACCTGGCCGAGAACGACTGGGAGATGGAAAGAGCGCTGGACTCCTACTTCGAGCCGGCCGTGGAGGAGAGCGCTTTAAAAAGCCATCTTGAGACCACCTCGGAGCCCGAGTTCTGTGTTGACCTAACCAAGGAAGAAACAAGTGATTCCATTAGTTCTAAAACCAGCACATCTGAAAATGTTCAGCAAGAAGATGGCAGCATGTTCTCTTTCATTACCTGGAATATTGATGGATTGGACCTCAACAATCTGCCAGAGAGGGCTCGAGGGGTGTGTTCCTATTTAACTTTGTACAGCCCAGATGTGGTATTTCTACAGGAAGTTATTCCCCCATATTCTGCCTACCTAAAGAAGAAAGCAAGTAGTTACGAGATAATTACAGCATTTGAAGGTCATGAAAAAGGATATTTCACAGCTATAATGTTGAAGAAATCGAGATTGAAATTTAAAAGCCAAGAGATTATTCCTTTTCCAAATACAAAAATGATGAGAAACCTTTTGTGTGTGCATGTGAGTGTGTCAGGAAATGAACTTTGCCTTATGACTTCTCATTTGGAGAGCACCAGAGGGCATGCTAAGGAACGAATGAATCAGTTGAAAATAGTTTTAAAGAAAATGCAAGAGGCTCCAGAGTCAGCTACAGTTATATTTGCAGGAGATACAAATTTAAGGGATCATGAAGTTACCAAATGTGGTGGTTTACCCAACAACATTTCGGATGTCTGGGAGTTTTTGGGCAAACCTAAGCATTGCCAGTATACATGGGATACACAAATGAACTCTAATCTTGGAATAGCTGCTACTTGTAAGCTTCGTTTTGATCGAATATTTTTTAGAGCAGCAGCGGAAGGCGGCCACATTATTCCCCGAAGTTTGGACCTCCTTGGGTTGGAAAAACTGGACTGTGGTAGATTTCCTAGTGATCACTGGGGGCTTCTGTGCAACTTGGATGTAATATTGTGA

Related Sequences

bmy_10266T0 Protein

Length: 366 aa      View alignments
>bmy_10266T0
MERKGGPDGAPEAEREEGEPEVKKRRLLCVEFASVASCDAAVAQCYLAENDWEMERALDSYFEPAVEESALKSHLETTSEPEFCVDLTKEETSDSISSKTSTSENVQQEDGSMFSFITWNIDGLDLNNLPERARGVCSYLTLYSPDVVFLQEVIPPYSAYLKKKASSYEIITAFEGHEKGYFTAIMLKKSRLKFKSQEIIPFPNTKMMRNLLCVHVSVSGNELCLMTSHLESTRGHAKERMNQLKIVLKKMQEAPESATVIFAGDTNLRDHEVTKCGGLPNNISDVWEFLGKPKHCQYTWDTQMNSNLGIAATCKLRFDRIFFRAAAEGGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDVIL*