Part of scaffold_532 (Scaffold)

For more information consult the page for scaffold_532 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DBR1 ENSTTRG00000004020 (Bottlenosed dolphin)

Gene Details

debranching RNA lariats 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003774, Bottlenosed dolphin)

Protein Percentage 97.58%
cDNA percentage 98.11%
Ka/Ks Ratio 0.28858 (Ka = 0.0115, Ks = 0.0398)

DBR1 ENSBTAG00000019949 (Cow)

Gene Details

lariat debranching enzyme

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026574, Cow)

Protein Percentage 94.14%
cDNA percentage 94.75%
Ka/Ks Ratio 0.22542 (Ka = 0.0301, Ks = 0.1333)

DBR1  (Minke Whale)

Gene Details

debranching RNA lariats 1

External Links

Gene match (Identifier: BACU003168, Minke Whale)

Protein Percentage 99.37%
cDNA percentage 99.23%
Ka/Ks Ratio 0.17692 (Ka = 0.0031, Ks = 0.0177)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1488 bp    Location:819055..831114   Strand:+
>bmy_10304
ATGCGGGTGGCTGTGGCCGGCTGCTGCCACGGCGAGCTGGACAAGATCTATGAGACGCTGGCGCTGGCGGAGCGGCGCGGCCCGGGGCCGATAGACCTTCTGCTGTGCTGCGGCGACTTCCAGGCTGTGCGCAACGAGGCCGACCTGCGCTGCATGGCCGTGCCGCCCAAGTACCGCCACATGCAGACCTTCTACAGGTATTACTCTGGAGAGAAAAAGGCCCCAGTTCTCACAATTTTCATCGGGGGTAACCATGAAGCCTCAAATCATTTGCAAGAGTTACCCTACGGTGGCTGGGTAGCACCAAACATTTATTATTTAGGCTTGGCAGGTGTAGTAAAATACCGAGGTGTAAGGATTGGTGGAATCTCTGGTCATTTTGAGTGCCCCCCCTATAATGCAGCTACAATAAGGAGTATCTATCATGTGAGAAATATTGAAGTCTACAAATTAAAACAGCTGAAGCAGCCTATGGACATATTCTTATCTCATGATTGGCCGAGAAGTATATATCATTATGGAAATAAGAAGCAACTTCTTAAGACTAAATCTTTTTTCCGACAAGAAGCCAAGGATAAAGGACAGTCAGCCAAAGCAACCAAATTTCTAGCCCTGGACAAATGCTTACCACACAGAGACTTTCTTCAGGTAATAGAAATAGAACATGACCCCAGTGCTCCTGATTACTTGGAGTATGATACTGAATGGCTCGCTATTCTCAGGGCTACTAATGATCTTATTAATGTGAGTGAGCGCCTATGGAATATGCCTGAAAATAATGGCCTGCATACAAGGTGGGATTACAGTGCAACAAAAGAAGCTATGAACGAAGTATTGGAAAAATTGAATCATGACCTCAAAGTTCCATGTAACTTTAGTGTAACGGCTGCTTGTTATGACCCTAGCAAGCCACAGACACAAATGCAGTTGGTTCATAGGATCAGTCCTCAGACTACTGAATTTTGTGCCCAACTTGGCATCACTGACATTAACATCAGGCTTCAGAAGGCCAAGGAAGAACAGCACGTGTGTGGTGACTCTGAAGAGCAGGATGACGTGGAGAGTAATGACTCTGGAGAAGACCCTAGTGAATATAACACAGACACATCCGCCCTGTCCTCTATTAATCCAGACGAGATAATGTTAGATGAAGAAGAGGAATATGATGATAGTATTGTAAGTGCACACAGTGACATGAATACACCATCTGTAGAACCGTCTTCTGATCAAGCTTCTGACTTTTCTGCAAGCTTCTCTGACATCAGGATCTTGCCAAGTTCCATGACTGTATCTTCTGATGATACATCTGGTTCCCCAGTTGGCAAGGAGGGGAATCGCGGTGACCCTGTGGAGTTGGGGGATGGAAAGGACTTAACCAAGGTGCCGTTGAAGAGGCTGAGTGATGAACATGAACCTGAACAAAGAAAGAAAATCAAGAGGAGGAATCAAGCCATCTATGCTGCAGTGGATAATGATGATACAGCCTAA

Related Sequences

bmy_10304T0 Protein

Length: 496 aa      View alignments
>bmy_10304T0
MRVAVAGCCHGELDKIYETLALAERRGPGPIDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGHFECPPYNAATIRSIYHVRNIEVYKLKQLKQPMDIFLSHDWPRSIYHYGNKKQLLKTKSFFRQEAKDKGQSAKATKFLALDKCLPHRDFLQVIEIEHDPSAPDYLEYDTEWLAILRATNDLINVSERLWNMPENNGLHTRWDYSATKEAMNEVLEKLNHDLKVPCNFSVTAACYDPSKPQTQMQLVHRISPQTTEFCAQLGITDINIRLQKAKEEQHVCGDSEEQDDVESNDSGEDPSEYNTDTSALSSINPDEIMLDEEEEYDDSIVSAHSDMNTPSVEPSSDQASDFSASFSDIRILPSSMTVSSDDTSGSPVGKEGNRGDPVELGDGKDLTKVPLKRLSDEHEPEQRKKIKRRNQAIYAAVDNDDTA*