Sequence detailsbmy_10307 (Coding sequence)

Part of scaffold_532 (SequenceType object (1))

For more information consult the page for scaffold_532 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLDN18ENSTTRG00000007340 (Bottlenosed dolphin)

Gene Details

claudin 18

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006945, Bottlenosed dolphin)

Protein Percentage 48.54%
cDNA percentage 49.71%
Ka/Ks Ratio 0.22712 (Ka = 0.0206, Ks = 0.0909)

CLDN18ENSBTAG00000014589 (Cow)

Gene Details

Claudin-18

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019421, Cow)

Protein Percentage 94.15%
cDNA percentage 94.15%
Ka/Ks Ratio 0.1404 (Ka = 0.0267, Ks = 0.1898)

Additional orthologs identified in other species via the OPTIC pipeline.

CLDN18 (Human)   Cldn18 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 582 bp    Location:964332..954006   Strand:-
Raw sequence 
>bmy_10307
ATGCTGCAGGCAGTGCGAGCCCTGATGATTGTGGGCATCGTCCTGAGTGTCATTGGCCTCCTGGTGGCCATCTTCGCCCTAAAGTGCATCCGCATTGGCAACATGGATGACTCTGCCAAAGCCAAAATGACACTTACCTCCGGGATCATGTTCATCATCTCAGGTCTCTGTGCAATCGCTGGAGTGTCTGTGTTTGCCAACATGCTGGTTACTAACTTCTGGATGTCCACAGCTAACATGTACACCAGTATGGGTGGGATGGTGCAGACCGTCCAGACCAGGTACACCTTTGGTGCGGCTCTGTTTGTTGGCTGGGTCGCTGGAGGCCTCACGCTAATTGGGGGCGTGCTGATGTGCATCGCTTGCCGGGGCCTGGCGCCCGAGGAAACCAAGCCTGGAGGCTTCAAAGCCAGCACTGGCTTTGAGTCCAACACCAAAACCAAGAAGATATATGATGGGGGTGCCCGCACAGAAGATGAGAGACAATCTCATCCTTCCAAGTACGACTACGTTTGGAAGTTAGAAAGCCTTGGTTTCACCTGTGAATGTGGTTTGAATTCCTATCAGTCACTTAGAGTTTAG

Related Sequences

bmy_10307T0 SequenceType object (3)

Length: 194 aa      View alignments
>bmy_10307T0
MLQAVRALMIVGIVLSVIGLLVAIFALKCIRIGNMDDSAKAKMTLTSGIMFIISGLCAIAGVSVFANMLVTNFWMSTANMYTSMGGMVQTVQTRYTFGAALFVGWVAGGLTLIGGVLMCIACRGLAPEETKPGGFKASTGFESNTKTKKIYDGGARTEDERQSHPSKYDYVWKLESLGFTCECGLNSYQSLRV*