Part of scaffold_523 (Scaffold)

For more information consult the page for scaffold_523 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GAD1 ENSTTRG00000004553 (Bottlenosed dolphin)

Gene Details

glutamate decarboxylase 1 (brain, 67kDa)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004290, Bottlenosed dolphin)

Protein Percentage 99.19%
cDNA percentage 98.92%
Ka/Ks Ratio 0.10189 (Ka = 0.0036, Ks = 0.0354)

GAD1 ENSBTAG00000007258 (Cow)

Gene Details

Glutamate decarboxylase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009547, Cow)

Protein Percentage 98.38%
cDNA percentage 94.5%
Ka/Ks Ratio 0.03241 (Ka = 0.0075, Ks = 0.2303)

GAD1  (Minke Whale)

Gene Details

glutamate decarboxylase 1 (brain, 67kDa)

External Links

Gene match (Identifier: BACU010118, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.73%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0086)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1113 bp    Location:809052..849614   Strand:+
>bmy_10312
ATGGAGCAAATAACACTTAAGAAGATGAGAGAGATAGTTGGATGGTCAAGTAAAGATGGTGATGGGATATTTTCTCCTGGGGGAGCCATATCCAACATGTACAGCATCATGGCTGCTCGCTACAAGTACTTCCCGGAAGTTAAGACAAAGGGCATGGCGGCCGTACCCAAGCTGGTCCTCTTCACCTCAGAACACAGTCACTATTCCATAAAGAAAGCTGGGGCTGCACTTGGCTTTGGAACCGACAATGTGATTTTGATAAAGTGCAATGAAAGGGGGAAGATAATTCCAGCTGACTTAGAGGCAAAAATTCTTGAAGCCAAGCAAAAGGGATACATTCCTCTGTATGTCAATGCAACTGCTGGCACGACTGTTTATGGCGCTTTTGATCCCATACAGGAGATTGCAGATATATGTGAGAAATACAACCTCTGGCTGCATGTCGATGCTGCCTGGGGTGGCGGGCTGCTCATGTCTCAGAAGCACCGCCATAAACTCAGCGGCATAGAAAGGGCCAACTCAGTCACCTGGAATCCTCACAAGATGATGGGCGTGCTGTTGCAGTGCTCCGCCATCCTGGTCAAGGAAAAGGGTATCCTCCAAGGATGCAACCAGATGTGCGCGGGGTACCTCTTCCAGCCAGACAAGCAGTATGACGTCTCCTACGACACTGGGGATAAAGCCATTCAGTGTGGCCGCCATGTGGACATCTTCAAGTTCTGGCTGATGTGGAAAGCAAAGGGCACAGTGGGCTTTGAAAATCAGATCAACAAATGCTTGGAGCTGGCAGAATACCTCTATGCCAAGATTAAAAACAGAGAGGAATTTGAGATGGTTTTTGATGGTGAGCCTGAGCACACGAATGTCTGTTTCTGGTATATTCCACAAAGCCTAAGGGGCCTTCTGGATAGCCCTGAGCGACGGGAAAAACTACACAAGGTGGCCCCGAAAATCAAAGCCCTGATGATGGAGTCTGGCACAACCATGGTTGGCTACCAGCCTCAGGGGGACAAGGCCAACTTCTTCCGGATGGTCATCTCCAACCCAGCCGCTACCCAGTCTGATATCGACTTCCTCATTGAGGAAATAGAGAGGCTGGGCCAGGATCTGTAA

Related Sequences

bmy_10312T0 Protein

Length: 371 aa      View alignments
>bmy_10312T0
MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADLEAKILEAKQKGYIPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSQKHRHKLSGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFDGEPEHTNVCFWYIPQSLRGLLDSPERREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL*