Part of scaffold_533 (Scaffold)

For more information consult the page for scaffold_533 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCEA1 ENSTTRG00000011825 (Bottlenosed dolphin)

Gene Details

transcription elongation factor A (SII), 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011209, Bottlenosed dolphin)

Protein Percentage 93.0%
cDNA percentage 94.89%
Ka/Ks Ratio 0.54571 (Ka = 0.0456, Ks = 0.0835)

TCEA1 ENSBTAG00000003460 (Cow)

Gene Details

Transcription elongation factor A protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004499, Cow)

Protein Percentage 98.21%
cDNA percentage 94.29%
Ka/Ks Ratio 0.03042 (Ka = 0.0068, Ks = 0.2243)

TCEA1  (Minke Whale)

Gene Details

transcription elongation factor A (SII), 1

External Links

Gene match (Identifier: BACU002335, Minke Whale)

Protein Percentage 90.04%
cDNA percentage 91.64%
Ka/Ks Ratio 0.4632 (Ka = 0.0735, Ks = 0.1587)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1044 bp    Location:78307..54083   Strand:-
>bmy_10318
ATGCTGGAGGTGCTGCGGCATCTTGGGGACCCTCCCCTCCGCCTCCATTCCCACGTCCCCAGGCAGCTGCCCTCCATGAATTTTGGGGCTGGAGCATTGGATTTACTGAAGGAGCTTAAGAATATTCCCATGACCTTGGAATTATTACAGTCCACAAGAATCGGAATGTCAGTGAATGCTATTCGCAAGCAGAGCACAGATGAAGAAGTTACATCTTTAGCAAAGTCCCTCATCAAATCCTGGAAAAAGTTATTAGATGGACCATCAACAGATAAAGACTCTGAAGAAAAGAAAAAAGATACTRCAGTTACATCACAGAATAGCCCTGAAGCAAGAGAAGAAAGTAGCTCCAGTGGCAACGTAAGCAGCAGAAAGGATGAGACAAATGCCCGAGACACTTACGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGGTTAAAGTGTAGGGAGATGCTCGCTGCGGCTCTCCGAACGGGAGATGACTACATCGCTATTGGAGCTGATGAGGAAGAATTAGGATCTCAAATCGAGGAAGATATCCTTTGCGTGTATATTCATAATTTACCTATCTATCAAGAAATAAGGAATACGGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAGGATGCTAAGAATCCAAATTTAAGGAAAAATGTGCTGTGTGGGAATATTCCTCCTGACTTATTTGCTAGAATGACGGCAGAGGAGATGGCCAGCGATGAGCTCAAAGAGATGCGGAAAAACTTGACCAAAGAAGCCATCAGAGAGCATCAGATGGCCAAGACAGGTGGGACCCAGACGGACTTGTTCACATGTGGCAAATGCAAGAAGAAGAACTGCACTTACACACAGGTCCAAACGCGGAGTGCTGATGAACCGATGACAACGTTTGTTGTCTGCAACGAGTGTGGAAACCGGTGGAAGATTTCGGTTCTGGAAAAACTACTCTACCTTGTTGAAATCCAGCCCGATGGTTCTGTTGAGTTGGAAGAATTGGCAAAACGTCTGGACCATTAA

Related Sequences

bmy_10318T0 Protein

Length: 348 aa      View alignments
>bmy_10318T0
MLEVLRHLGDPPLRLHSHVPRQLPSMNFGAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKDTXVTSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILCVYIHNLPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKISVLEKLLYLVEIQPDGSVELEELAKRLDH*