Sequence detailsbmy_10332 (Coding sequence)

Part of scaffold_527 (SequenceType object (1))

For more information consult the page for scaffold_527 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA4BENSTTRG00000016095 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015254, Bottlenosed dolphin)

Protein Percentage 96.34%
cDNA percentage 97.1%
Ka/Ks Ratio 0.1953 (Ka = 0.0165, Ks = 0.0843)

SEMA4BENSBTAG00000021273 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028346, Cow)

Protein Percentage 83.23%
cDNA percentage 87.63%
Ka/Ks Ratio 0.1929 (Ka = 0.0856, Ks = 0.4439)

SEMA4B (Minke Whale)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B

External Links

Gene match (Identifier: BACU016077, Minke Whale)

Protein Percentage 98.36%
cDNA percentage 98.28%
Ka/Ks Ratio 0.13625 (Ka = 0.0076, Ks = 0.0557)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA4B (Human)   Sema4b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2382 bp    Location:63155..73758   Strand:+
Raw sequence 
>bmy_10332
CCATCGATCGTCCTCTCTCCAGGCTCTGAAAAGCAGTCACTTCTCAGATTTGAAGTGGATCACATCTCCAACTACACAGCCCTCCTGCTGAGCAGGGATGGCAGGACTCTATACGTGGGTGCTCGAGAGGCCCTCTTTGCGCTCAACARCAGCGGCAGCTTCCTGCCAGGCGGGGGGTACCAGGAGCTGCTGTGGAGCGCAGATGCAGAGAGGAAACAGCAGTGCAGCTTCAAGGGCAAGGACCCACAGCGGGACTGTCAAAACTACATCAAGATCCTCCTGCCACTCAACAGCAGCCACCTGTTCACCTGTGGCACTGCGGCCTTCAGCCCTGTGTGCACCTACGTTAACATGGAGAACTTCACTCTGGCACAGGACGTGGTGGGGAACATCCTCCTGGAAGATGGCAAGGGCCGTTGTCCCTTTGACCCCAATTTCAAGTCCACGGCCCTGGTGGTGGATGGCGAGCTGTACACTGGAACAGTCAGCAGCTTCCAGGGGAATGACCCGGCCATCTCACGTAGCCAAAGCCTCCGCCCCACCAAGACTGAGAGCTCCCTCAACTGGCTACAAGACCCAGCATTTGTGGCCTCAGCCTACATTCCCGAGAGCCTGGGCAGCCTGCAAGGGGACGATGACAAGATCTACTTCTTCTTCAGCGAGACTGGCCAGGAATTTGAGTTCTTTGAGAACACCATCGTGTCCCGCATTGCCCGTGTCTGCAAGGGTGATGCGGGAGGCGAGCGGGTCCTGCAGCAGCGCTGGACGTCCTTCCTGAAGGCCCAGCTGCTGTGCTTGCGGCCTGACGATGGCTTCCCGTTCAACGTACTGCAAGAYGTCTTCACGCTGAGCCCCAGCCCCCAGGAATGGCGTGACACCCTCTTCTACGGGGTCTTCACATCCCAGTGGCACAGGGGGACCACAGAAGGCTCTGCCATCTGTGTCTTCACCATGAGGGATGTGCAGAGGGCCTTCAATGGCCTCTACAAGGAGGTGAACCGCGAGACGCAGCAGTGGTACACCGTGACCCACCCGGTGCCCTCGCCCCGGCCCGGCGCGTGCATCACCAACAGCGCCCGGGAAAGGAAGATCAGCTCGTCCCTGCAGCTCCCCGACCGTGTGCTGAACTTCCTCAAGGACCACTTCCTGATGGATGGGCAGGTCCGCAGCCGCCTGTTACTCCTGCAGCCCCAGGCCCGCTACCAGCGTGTGGCTGTCCACCGTGTCCCTGGCCTGCAGCGCACCTACGACGTCCTCTTCCTAGGCACTAGTGACGGCTGGCTGCACAAGGCGGTGAGCGTGGGCCCCGGGGTGCATATCATCGAGGAGCTCCAGATCTTCTCATCAGGACAGCCCGTGCAGAACCTGCTCCTGGATGCCGACAGGGGACTGCTGTATGGTGCCTCACACTCGGGTGTGGTCCAGGTGCCCGTGGCCAACTGCAGCCTGTACCAGAGCTGTGGGGACTGCCTCCTGGCCCGGGACCCCTACTGCGCTTGGAGCGGCTCCAGCTGCAAGCACGTCAGCCTCTACCGGCCTGCGGTGGCCTCCAGGCCATGGATCCAGGACATCGAGGGGGCCAATGCCAGGGAACTCTGCAACACTTCCTCGTCCAAGGGCCGGACTTCTATACCAAGAGGCGAGAAGCATTGTGAGCCAGTCCAGTTCCAGCCCCACACAGTGAACACCTTGGCCTGCCCCCTCCTCTCCAACTTGGCAACCCGGCTCTGGCTGCACAACGGGGTCCCCATTAATGCCTCGGCCTCCTGCCGCGTGCTGTCCACCGGGGACCTGCTGCTGGTGGGCAGCCAGCAGGAGCTGGGAGAGTTCCAGTGCTGGTCGCTGGAGGAGGGCTTCCGGCAGCTGGAGGCCAGCTACTGCCCAAAGGTGGTGGGAGACGCAGTGGCAGACCGAGCAGACCGGAGTGGCAGTGTGCCCGTCATCATCAACACGTCTCGGGTGAGCGCGCCGGCCGGGGGCAAGGCCAGCTGGGGTGCAGACAAGTCCTACTGGACCGAGTTCCTAGTGATGTGTGCGCTGTTCGTGTTCGCCATGGTGCTCTTCATTTTATTCTTCCTCTACCGGCACCGGGGCGGCATGAAAGTCTTCTTGAAGCAGGGGGAGTGTGCCAGCGTGCACCCCAAGACCCGCCCAGTGGTACTGCCACCTGAGACCCGGCCGCTCAATGGCGTGGGCCCCCCTAGCACCCCACTCGACCACCGAGGCTACCAGGCTCTGTCGGACAGCTCCCCAGGGCCCCGGGTCTTCACAGAGTCAGAGAAGAGGCCGCTCAGTATCCAGGACAGCTTCGTGGAGGTGTCCCCGGTGTGTCCCCGGCCCCGGGTCCGCCTGGGCTCTGAAATCCGGGACTCCGTGGTGTGA

Related Sequences

bmy_10332T0 SequenceType object (3)

Length: 794 aa      View alignments
>bmy_10332T0
PSIVLSPGSEKQSLLRFEVDHISNYTALLLSRDGRTLYVGAREALFALNXSGSFLPGGGYQELLWSADAERKQQCSFKGKDPQRDCQNYIKILLPLNSSHLFTCGTAAFSPVCTYVNMENFTLAQDVVGNILLEDGKGRCPFDPNFKSTALVVDGELYTGTVSSFQGNDPAISRSQSLRPTKTESSLNWLQDPAFVASAYIPESLGSLQGDDDKIYFFFSETGQEFEFFENTIVSRIARVCKGDAGGERVLQQRWTSFLKAQLLCLRPDDGFPFNVLQDVFTLSPSPQEWRDTLFYGVFTSQWHRGTTEGSAICVFTMRDVQRAFNGLYKEVNRETQQWYTVTHPVPSPRPGACITNSARERKISSSLQLPDRVLNFLKDHFLMDGQVRSRLLLLQPQARYQRVAVHRVPGLQRTYDVLFLGTSDGWLHKAVSVGPGVHIIEELQIFSSGQPVQNLLLDADRGLLYGASHSGVVQVPVANCSLYQSCGDCLLARDPYCAWSGSSCKHVSLYRPAVASRPWIQDIEGANARELCNTSSSKGRTSIPRGEKHCEPVQFQPHTVNTLACPLLSNLATRLWLHNGVPINASASCRVLSTGDLLLVGSQQELGEFQCWSLEEGFRQLEASYCPKVVGDAVADRADRSGSVPVIINTSRVSAPAGGKASWGADKSYWTEFLVMCALFVFAMVLFILFFLYRHRGGMKVFLKQGECASVHPKTRPVVLPPETRPLNGVGPPSTPLDHRGYQALSDSSPGPRVFTESEKRPLSIQDSFVEVSPVCPRPRVRLGSEIRDSVV*