Part of scaffold_527 (Scaffold)

For more information consult the page for scaffold_527 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS33B ENSTTRG00000012665 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 33 homolog B (yeast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012026, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.86%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0419)

VPS33B ENSBTAG00000000026 (Cow)

Gene Details

Vacuolar protein sorting-associated protein 33B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000029, Cow)

Protein Percentage 97.41%
cDNA percentage 94.22%
Ka/Ks Ratio 0.05451 (Ka = 0.0121, Ks = 0.2228)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1854 bp    Location:122281..142331   Strand:+
>bmy_10336
ATGGCTTTTCCCCATCGGCCGGATGCCCCAGAGCTGCCTGACTTCTCCATGCTCAAGAGGCTGGCCCGAGACCAGCTCATCTATCTGCTGGAGCAGCTTCCAGGAAAAAAGGACTTGTTCATTGAGGCAGATCTCATGAGCCCGTTGGATCGAATCGCCAATGTCTCCATCCTAAAGCAACATGAAGTAGACAAGCTGTACAAAGTGGAGAACAAGCCAGCCTTCAGCTCCAGTGAACAATTGTGCTTCTTGGTCAGACCTCGCATCAAGAATATGCGGTACATTGCCAATCTTGTCAATGCTGACAAAATGGCTGGCCGAACTCGGAAATACAAAGTGATCTTCAGTCCTCAGAAGTTTTATGCGTGCGAGATGGTGCTTGAGGAAGAGGGCATCTAYGGAGATGTGAGCTGTGACGAATGGGCCTTCTCTTTGTTGCCTCTTGATGTGGATCTGTTGAGCATGGAACTACCAGAATTTTTCAGAGACTACTTCCTGGAAGGAGATCAGTGTTGGATCAACACTGTGGCACAGGCCTTGCACCTCCTCAGCACGCTCTATGGACCCTTCCCTAACTGCTATGGAATTGGCAGATGTGCTAAGATGTCACATGAATTGTGGAGGAAACTGGAAGAGGAGGAGGATGGTGAAACCAAGGGCCGAAGGCCAGAAATTGGACATGTCTTTCTCCTGGACAGAGATGTGGACTTTGTGACGGCACTTTGCTCCCAGGTGGTTTACGAGGGCCTGGTGGATGACACCTTCCGCGTCAAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGTCTGAAGGTGCTGCTCAACGCCGAGGACAAGGTGTTTAATGAGATTCGTAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACCTGCAGGCCCAGTATGACCGCCGGAGAGGCATGGACATCAAGCAGATGAAGAACTTCGTGTCCCAGGAGCTCAAGGGACTGAAGCAGGAACACCGCCTGCTGAGTCTCCATATCGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAACTCATCAAGACTGAGCATGCGCTGCTGGAGGGCTTCAGCATCCGTGAGAGCACCAACTACATTGAAGAGCACATAGACCGGCAGGTGTCACCCATAGAAAGCCTTCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTGATCCCCAAGGATTACCGATCCCTGAAAACCCAGTATCTGCAGAGCTATGGCCCCGAGCACCTGCTAACCTTCTCCAATCTGCGGCGAGCTGGGCTCCTAACGGAGCAGGCCCCGGGGGACACCCTCACAGCTGTGGAGAGTAAAGTGAGCAAGCTGGTGACGGACAAGGCTGCAGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTCCGCGCCATCAGCAAGAAGCTGAATTTGATCCCACGTGTGGATGGCGAGTATGATCTGAAGGTGCCACGTGACATGGCATATGTGTTCAGTGGTGCTTACGTGCCCCTCAGCTGCCGAATCATCGAGCAGGTGCTGGAGCGGCAAAGCTGGCAGGGCCTGGACGAAGTGGTGCGGCTTCTCAACTGCAGTGAGCTGGCATTCACAGACATGACCAAGGAAGACAAGGCTTCCAGCGAGTCCCTGCGCCTCATCTTGGTGGTGTTCTTGGGTGGTTGCACATTCTCTGAGATCTCAGCCCTCCGGTTCCTGGGCAGAGAGAAAGGGTACAGGTTCATTTTTCTGACGACAGCAGTCACCAACAGCGTTCGCCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGA

Related Sequences

bmy_10336T0 Protein

Length: 618 aa      View alignments
>bmy_10336T0
MAFPHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPAFSSSEQLCFLVRPRIKNMRYIANLVNADKMAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQCWINTVAQALHLLSTLYGPFPNCYGIGRCAKMSHELWRKLEEEEDGETKGRRPEIGHVFLLDRDVDFVTALCSQVVYEGLVDDTFRVKCGSVDFGPEVTSSDKSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQYDRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLEGFSIRESTNYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLLTEQAPGDTLTAVESKVSKLVTDKAAGKITDAFSSLAKRSNFRAISKKLNLIPRVDGEYDLKVPRDMAYVFSGAYVPLSCRIIEQVLERQSWQGLDEVVRLLNCSELAFTDMTKEDKASSESLRLILVVFLGGCTFSEISALRFLGREKGYRFIFLTTAVTNSVRLMEAMSEVKA*