Sequence detailsbmy_10336 (Coding sequence)

Part of scaffold_527 (SequenceType object (1))

For more information consult the page for scaffold_527 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS33BENSTTRG00000012665 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 33 homolog B (yeast)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012026, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.86%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0419)

VPS33BENSBTAG00000000026 (Cow)

Gene Details

Vacuolar protein sorting-associated protein 33B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000029, Cow)

Protein Percentage 97.41%
cDNA percentage 94.22%
Ka/Ks Ratio 0.05451 (Ka = 0.0121, Ks = 0.2228)

Additional orthologs identified in other species via the OPTIC pipeline.

VPS33B (Human)   Vps33b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1854 bp    Location:122281..142331   Strand:+
Raw sequence 
>bmy_10336
ATGGCTTTTCCCCATCGGCCGGATGCCCCAGAGCTGCCTGACTTCTCCATGCTCAAGAGGCTGGCCCGAGACCAGCTCATCTATCTGCTGGAGCAGCTTCCAGGAAAAAAGGACTTGTTCATTGAGGCAGATCTCATGAGCCCGTTGGATCGAATCGCCAATGTCTCCATCCTAAAGCAACATGAAGTAGACAAGCTGTACAAAGTGGAGAACAAGCCAGCCTTCAGCTCCAGTGAACAATTGTGCTTCTTGGTCAGACCTCGCATCAAGAATATGCGGTACATTGCCAATCTTGTCAATGCTGACAAAATGGCTGGCCGAACTCGGAAATACAAAGTGATCTTCAGTCCTCAGAAGTTTTATGCGTGCGAGATGGTGCTTGAGGAAGAGGGCATCTAYGGAGATGTGAGCTGTGACGAATGGGCCTTCTCTTTGTTGCCTCTTGATGTGGATCTGTTGAGCATGGAACTACCAGAATTTTTCAGAGACTACTTCCTGGAAGGAGATCAGTGTTGGATCAACACTGTGGCACAGGCCTTGCACCTCCTCAGCACGCTCTATGGACCCTTCCCTAACTGCTATGGAATTGGCAGATGTGCTAAGATGTCACATGAATTGTGGAGGAAACTGGAAGAGGAGGAGGATGGTGAAACCAAGGGCCGAAGGCCAGAAATTGGACATGTCTTTCTCCTGGACAGAGATGTGGACTTTGTGACGGCACTTTGCTCCCAGGTGGTTTACGAGGGCCTGGTGGATGACACCTTCCGCGTCAAGTGTGGGAGTGTCGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGTCTGAAGGTGCTGCTCAACGCCGAGGACAAGGTGTTTAATGAGATTCGTAACGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACCTGCAGGCCCAGTATGACCGCCGGAGAGGCATGGACATCAAGCAGATGAAGAACTTCGTGTCCCAGGAGCTCAAGGGACTGAAGCAGGAACACCGCCTGCTGAGTCTCCATATCGGGGCCTGTGAATCCATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAACTCATCAAGACTGAGCATGCGCTGCTGGAGGGCTTCAGCATCCGTGAGAGCACCAACTACATTGAAGAGCACATAGACCGGCAGGTGTCACCCATAGAAAGCCTTCGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTGATCCCCAAGGATTACCGATCCCTGAAAACCCAGTATCTGCAGAGCTATGGCCCCGAGCACCTGCTAACCTTCTCCAATCTGCGGCGAGCTGGGCTCCTAACGGAGCAGGCCCCGGGGGACACCCTCACAGCTGTGGAGAGTAAAGTGAGCAAGCTGGTGACGGACAAGGCTGCAGGAAAGATTACTGATGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTCCGCGCCATCAGCAAGAAGCTGAATTTGATCCCACGTGTGGATGGCGAGTATGATCTGAAGGTGCCACGTGACATGGCATATGTGTTCAGTGGTGCTTACGTGCCCCTCAGCTGCCGAATCATCGAGCAGGTGCTGGAGCGGCAAAGCTGGCAGGGCCTGGACGAAGTGGTGCGGCTTCTCAACTGCAGTGAGCTGGCATTCACAGACATGACCAAGGAAGACAAGGCTTCCAGCGAGTCCCTGCGCCTCATCTTGGTGGTGTTCTTGGGTGGTTGCACATTCTCTGAGATCTCAGCCCTCCGGTTCCTGGGCAGAGAGAAAGGGTACAGGTTCATTTTTCTGACGACAGCAGTCACCAACAGCGTTCGCCTTATGGAGGCCATGAGTGAGGTGAAAGCCTGA

Related Sequences

bmy_10336T0 SequenceType object (3)

Length: 618 aa      View alignments
>bmy_10336T0
MAFPHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPAFSSSEQLCFLVRPRIKNMRYIANLVNADKMAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQCWINTVAQALHLLSTLYGPFPNCYGIGRCAKMSHELWRKLEEEEDGETKGRRPEIGHVFLLDRDVDFVTALCSQVVYEGLVDDTFRVKCGSVDFGPEVTSSDKSLKVLLNAEDKVFNEIRNEHFSNVFGFLSQKARNLQAQYDRRRGMDIKQMKNFVSQELKGLKQEHRLLSLHIGACESIMKKKTKQDFQELIKTEHALLEGFSIRESTNYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDYRSLKTQYLQSYGPEHLLTFSNLRRAGLLTEQAPGDTLTAVESKVSKLVTDKAAGKITDAFSSLAKRSNFRAISKKLNLIPRVDGEYDLKVPRDMAYVFSGAYVPLSCRIIEQVLERQSWQGLDEVVRLLNCSELAFTDMTKEDKASSESLRLILVVFLGGCTFSEISALRFLGREKGYRFIFLTTAVTNSVRLMEAMSEVKA*