Part of scaffold_527 (Scaffold)

For more information consult the page for scaffold_527 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RCCD1 ENSTTRG00000007907 (Bottlenosed dolphin)

Gene Details

RCC1 domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007480, Bottlenosed dolphin)

Protein Percentage 81.76%
cDNA percentage 82.66%
Ka/Ks Ratio 0.33301 (Ka = 0.0128, Ks = 0.0386)

RCCD1 ENSBTAG00000018642 (Cow)

Gene Details

RCC1 domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024803, Cow)

Protein Percentage 86.49%
cDNA percentage 89.08%
Ka/Ks Ratio 0.25462 (Ka = 0.0737, Ks = 0.2893)

RCCD1  (Minke Whale)

Gene Details

RCC1 domain containing 1

External Links

Gene match (Identifier: BACU016074, Minke Whale)

Protein Percentage 87.77%
cDNA percentage 88.3%
Ka/Ks Ratio 0.48707 (Ka = 0.1048, Ks = 0.2152)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1080 bp    Location:189077..184073   Strand:-
>bmy_10338
GCACATCTTCTGCCTCTGTGGTTAGGAGGATGGCATTTTCCCCATTTTACAGGTGAGGCAGCTTCAGTGTACCGCAAGGGCTCATCTGGAAGAATCTCTTCGAGTTCTAGCCTTAACCCTCCATCCCGCCGGCCGCCGCAGCCAGGTCGCAGCCAGCAGAGGGCGCTGCCGGGCATGGCCGAGGAGCGTCGCGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGCACTGGGCTCGGGGCGCGGGCGCCAGGTACACAGCCCCGAGCCTCTGAGGGCGCCGGGCGCGGGCCTCGATGTCTGCCGCGTGAGCGCGAGCTGGAGCTACACCGCCTTCGTGACCCGTGGAGGAGGCCAGGTGGAGCTGTCTGGCTTCGCCGTCGGAGCGGTGGGCGGCTGCAGGGACGCGTGGGCGTCGGAGGAGCTCCTGGTGGTGCTGCGCGCGGGGCCGGGACCCGGGGCCGGGATGGAGCTGCAGGCCTGGGCGCCCGGTTCGGCGCTGCGCGGGGAGCCCCTCTGGGCCCAGACCGTGCCGGAGGCCGAGCGGGAAGACGGACCGGGCGGCGATGAGACCCAGGCTGGGCCGCTGCCGCTGCTGCCCTGCGCTCGCGCCTACGTGAGCCCGCGGCCGCCCTTCTACCGGCCTCTGGCCCCGACACTGCGGGCGCGCCGGCTGGAGCTGGGCGCTGAGCACGCGTTGCTGCTGGACGCGGCGGGCCAGGTGTTCTCCTGGGGCGCGGGCAGGCACGGACAGCTGGGCCACGGGACTCTGGAGGCAGAGCCGGAGCCGAGGCTGCTGCAGGCGCTGCAGGGCCTAACCATGGCTGAGGTGGCCGCAGGTGGCTGGCACTCTCTGTGTGTGAGTGCCTCAGGACTGAATGAAGATGGTTCTGAAGTGAAGAGAGTAGCCGGGGGTGAGGATGGAGCCCCCACCCCCTTCATAGCTGTCCAGCCCTTCCCGGCTTTATTGGACCTCCCCCTGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCGGTGGTGACAAGAACGGGGGAGCTCTACACCTGGGGCTGGGGTAAGTAA

Related Sequences

bmy_10338T0 Protein

Length: 360 aa      View alignments
>bmy_10338T0
AHLLPLWLGGWHFPHFTGEAASVYRKGSSGRISSSSSLNPPSRRPPQPGRSQQRALPGMAEERRGAWFGFGFCGFGQALGSGRGRQVHSPEPLRAPGAGLDVCRVSASWSYTAFVTRGGGQVELSGFAVGAVGGCRDAWASEELLVVLRAGPGPGAGMELQAWAPGSALRGEPLWAQTVPEAEREDGPGGDETQAGPLPLLPCARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLQALQGLTMAEVAAGGWHSLCVSASGLNEDGSEVKRVAGGEDGAPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK*