Part of scaffold_536 (Scaffold)

For more information consult the page for scaffold_536 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF3C6 ENSTTRG00000012353 (Bottlenosed dolphin)

Gene Details

general transcription factor IIIC, polypeptide 6, alpha 35kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011715, Bottlenosed dolphin)

Protein Percentage 73.27%
cDNA percentage 73.93%
Ka/Ks Ratio 0.25507 (Ka = 0.0113, Ks = 0.0442)

GTF3C6 ENSBTAG00000016582 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022058, Cow)

Protein Percentage 91.0%
cDNA percentage 95.0%
Ka/Ks Ratio 0.41169 (Ka = 0.0403, Ks = 0.0978)

GTF3C6  (Minke Whale)

Gene Details

general transcription factor IIIC, polypeptide 6, alpha 35kDa

External Links

Gene match (Identifier: BACU001905, Minke Whale)

Protein Percentage 93.57%
cDNA percentage 96.3%
Ka/Ks Ratio 0.5776 (Ka = 0.033, Ks = 0.0572)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 603 bp    Location:151409..159879   Strand:+
>bmy_10359
GAGCAGTTGGTTCTGGTGGAATTATCAGGAATTATTGATTCAGACTTTCTCTCAAAATGTGAAAATAAATGCAAGATTTTGGGAATTGATACTGAGAAGCCCATTCTGCAAGTGGACAGCTATGTCTTTGCTGGAGAGTATGAAGACACTCTTGGGACCTGTGTTATATTTGAAGAAAACGTTGAACATGTGGATGCAGAAGGCAATAATAAAACAGTGCTAAAATATAAATGCCACACAATGAAGAAGCTCAGCATGACAAGAACTCTTCTGACAGAAAAGAAGGAAGGAGAAGAAAACATAGGTGGTGTGGAATGGCTGCAAATCAAGGAAAATGATTTCTCCTGTAGACCCAACATGATTTGTAGTTTTCTGCATGAAAATGAAGAGGATGAAGTTGTAGCTCCAGACCCAGATAAATCTTTGGAGTTGGAAGAGCAAGAGATTCAAATGAAAGATAATTCAAACCTGAGTTATGAACAGGAGAAACCACCGAACTTGGATATAGAGGATTCTGGTCCTCTTATTGATATCCCTTCTGAGACAGAAGGCTCTGTTTTTATGGAAACTCAAGAAACTGCCTTAGAAATCACTCCTAGATGA

Related Sequences

bmy_10359T0 Protein

Length: 201 aa      View alignments
>bmy_10359T0
EQLVLVELSGIIDSDFLSKCENKCKILGIDTEKPILQVDSYVFAGEYEDTLGTCVIFEENVEHVDAEGNNKTVLKYKCHTMKKLSMTRTLLTEKKEGEENIGGVEWLQIKENDFSCRPNMICSFLHENEEDEVVAPDPDKSLELEEQEIQMKDNSNLSYEQEKPPNLDIEDSGPLIDIPSETEGSVFMETQETALEITPR*