Part of scaffold_531 (Scaffold)

For more information consult the page for scaffold_531 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNAPC5 ENSTTRG00000010201 (Bottlenosed dolphin)

Gene Details

small nuclear RNA activating complex, polypeptide 5, 19kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009669, Bottlenosed dolphin)

Protein Percentage 97.89%
cDNA percentage 95.44%
Ka/Ks Ratio 0.06109 (Ka = 0.0097, Ks = 0.1596)

SNAPC5 ENSBTAG00000005210 (Cow)

Gene Details

snRNA-activating protein complex subunit 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006862, Cow)

Protein Percentage 93.81%
cDNA percentage 92.1%
Ka/Ks Ratio 0.11718 (Ka = 0.0329, Ks = 0.2807)

SNAPC5  (Minke Whale)

Gene Details

small nuclear RNA activating complex, polypeptide 5, 19kDa

External Links

Gene match (Identifier: BACU019669, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 97.94%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0781)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 297 bp    Location:643098..646835   Strand:+
>bmy_10378
ATGTTGAGCCGGCTTCAGGAGCTGCGCAAGGAGGAGGAGACGCTGCTCCGCTTGAAAGCGGCCCTGCACGACCAGCTGAACCGGCTCAAGGTTGAAGAACTGGCCCTCCAGTCAATGATTAGTTCTAGAAGAGAAGATGAGATGCCGTCTTCTCAACCTGCGCCTGAACAGTCACATGATCAGATGTTGGTGCATGTAGACAATGAAGCATCAATCAACCAGACTGCACTGGAGTTGAGCACCAGGAGCCATGTGCCAGAAGAGGAAGAGGAGGAGGAAGAAGAATCCGATTCCTGA

Related Sequences

bmy_10378T0 Protein

Length: 99 aa      View alignments
>bmy_10378T0
MLSRLQELRKEEETLLRLKAALHDQLNRLKVEELALQSMISSRREDEMPSSQPAPEQSHDQMLVHVDNEASINQTALELSTRSHVPEEEEEEEEESDS*