Part of scaffold_546 (SequenceType object (1))

For more information consult the page for scaffold_546 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP205ENSTTRG00000016679 (Bottlenosed dolphin)

Gene Details

nucleoporin 205kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015820, Bottlenosed dolphin)

Protein Percentage 94.68%
cDNA percentage 94.27%
Ka/Ks Ratio 0.2005 (Ka = 0.0097, Ks = 0.0484)

NUP205ENSBTAG00000011127 (Cow)

Gene Details

nuclear pore complex protein Nup205

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042092, Cow)

Protein Percentage 97.82%
cDNA percentage 93.47%
Ka/Ks Ratio 0.05288 (Ka = 0.013, Ks = 0.2461)

NUP205 (Minke Whale)

Gene Details

nucleoporin 205kDa

External Links

Gene match (Identifier: BACU006766, Minke Whale)

Protein Percentage 98.63%
cDNA percentage 98.47%
Ka/Ks Ratio 0.33785 (Ka = 0.0103, Ks = 0.0305)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 3729 bp    Location:46740..264   Strand:-
>bmy_10384
ATGGCGACGCTGTTGGCGGTAAATTCGGCTGCTAGTCTGTGGGGTCCTTACAAAGACATTTGGCAGACTGTGGGAAATGCTCTTTGGAGAAGACAACCTGAAGCTGTCCACCTTCTTGACATGATTTTGAAGAAACACAAACCTGACTTCATCTCATTGTTCAGAAACCCACCAAAAAATGTTCAACAACATGAGAAGGTTCAGAAAGCCAGTACAGAGGGAGTTGCTATCCAGGGTCAACAGGGAACCCGACTTCTTCCTGAACAGCTCATTAAAGAAGCCTTTATCCTCAGTGACCTTTTTGATATTGGAGAATTGGCAGCTGTTGAGCTTCTCCTTGCTGGAGAGCACCAGCAGCCACATTTTCCTGGCCTCACCAGAGGCTTGGTAGCTGTTCTTTTATACTGGGATGGAAAGCGGTGCATTGCAAATTCCCTGAAAGCCTTGATACAGTCTCGACGAGGAAAGACATGGACCCTCGAACTCAGTCCAGAGCTGGTTTCCATGACAACACGGTTTACTGATGAGCTGATGGAGCAAGGATTGACTTACAAAGTTCTTACTCTTGTGTCACAGATTGATGTTAACAATGAGTTTGAGAAACTACAGCGTGAGAGAGGTTTGGGCAGTGAAAAACATCGAAAAGAGGCAAGGGTTTCTGATCTCATCAAGGAGTGCAGGCAGTCTCTGGCAGAAAGCCTTTTTGCCTGGGCTTGCCAATCACCTTTAGGCAAAGATGACACTCTGCTCCTTATTGGACATTTGGAAAGAGTGACTGTTGAGGCTAATGGCTCGTTGGATGCAGTGAATCTGGCTCTTCTTATGGCACTTCTGTACTGCTTTGATATCAGTTTTATAGAACAAAGCACAGAGGAACGTGATGATATGATTCATCAACTTCCACTGTTGACAGAGAGACAATATATTGCAACAATTCACTCTCGTCTTCAAGACTCACAGCCTTGGAAACTGCCGGGGCTGCAAGCCACTGTGAGACTTGCCTGGGCACTGGCGTTGAGGGGGATATCTCAGCTCCCTGATGTGACAGCTCTGGCTGAATTCACAGAAGCAGATGAAGCAATGGCAGAGCTCGCAATTGCAGACAGTGTTTTCCTGTTCCTCACTGAATCCGTAGTGGTGTCAGAAAACTTCTATCAGGAGGAATTTTATATTCGTAGAATCCATAATCTCATTACAGATTTCCTGGCACTTATGCCAATGAAGGTGAAGCAGTTGAGGAATCGGGCAGATGAAGATGCTCGAATGATTCACATGAGTATGCAGATGGGCAACGAACCCCCCATTTCACTTAGAAGGGATCTGGAACAATTAATGCTCTTGATTGGTGAGCTGTATAAAAAGAATCCTTTTAATTTGGAGCTTGCACTAGAATACTGGTGTCCCTCAGAGCCTCTTCAGACTTCCACTATCCTGGGTTCTTACCTTGGGGTGGCTCATCAGCGACCCCCTCAGCGCCAGGTTGTCTTGTCAAAGTTTGTTAGGCAAATGGGTGACCTGTTGCCTCCAACTATTTATATTCCTTATTTGAAAATGCTCCAGGGATTGGCCAATGGGCCCCAGTGTGCCCACTACTGTTTTAGTCTACTCAAAGTCAATGGTAGCAGTCATGTTGAAAATATTCAGGGGGCAGGCGGCAGTCCTGTTTCCTGGGAACATTTCTTTCACTCCTTGATGCTTTACCATGAACACCTGCGGAAGGATCTTCCGAGTGCTGATAGTGTCCAGTACCGTCACCTTCCTTCACGTGGCATCACCCAGAAGGAGCAGGACGGGTTGATTGCTTTTTTACAGCTCACATCTACCATCATTACTTGGAGTGAAAATGCTCGTTTGGCACTCTGTGAACATCCTCAGTGGACCCCCGTGGTGGTGATTCTGGGACTCCTGCAATGCAGTATCCCTCCTGTATTAAAGGCCGAACTATTGAAGACACTTGCAGCGTTTGGAAAATCTCCTGAAATTGCTGCTTCTCTCTGGCAGTCATTGGAATACACTCAGATACTGCAAACCGTAAGAGTTCCAAGCCAGAGGCAAGCTATTGGTATTGAGGTGGAACTAAATGAGATAGAATCCCGATGTGAAGAATACCCATTAACTCGTGCCTTTTGCCAGCTAATTAGTACCCTGGTGGAGAGCTCCTTTCCTTCTAATTTGGGCGCTGGACTGCGGCCTCCCGGCTTTGACCCTTATTTGCAGTTCCTTAGAGATTCTGTGTTTCTCCGATTCCGTACAAGAGCTTACCGGAGAGCAGCTGAAAAGTGGGAAGTCGCTGAGGTTGTTTTGGCGGTGTTTTATAAATTGCTCAGAGATTATGAACCTCAACTTGAAGATTTTGTAGACCAGTTTGTGGAACTACAAGGAGAAGAAATCATAGCCTATAAGCCACCAGGATTTAGTCTGATGTATCATCTTCTGAATGAGTCACCAATGTTGGAGCTTGCTCTTAGTTTACTGGAGGAAGGCGTTAAGCAGCTTGATACCTATGCTCCTTTCCCTGGGAAGAAACACCTGGAGAGAGCAGTGCAACATTGCCTTGCACTTCTCAATCTTACTCTGCAAAAGGAAAACCTCTTTATGGATCTCCTAAGAGAGAGTCAGCTGGCTCTAATAGTCTGTCCTTTAGAACAGCTATTGCAGGGAATCAATCCCAGAACTAAGAAGGCTGATAATGTGGTGAACATTGCTAGATACCTATATCATGGCAATACTAATCCAGAATTGGCTTTTGAAAGTGCCAAGATCCTCTGCTGTATCTCTTGCAATTCCAATATTCAGATAAAATTGGTTGGAGATTTCACACATGACCAGAGTGTAAGTCAGAAGCTGATGGCTGGATTTGTGGAGTGTTTGGATAGTGAAGATACAGAAGAATTTGTACGTCTAGAAGAGGGATCAGAACTTGAAAAGAAATTAGCTGGAATCCATCATGAAACAAGAATCCACATCTTGAATCTTCTCATCACCTCTCTGGAACGCAATCCRCCAAATCTTGCTCTCTACCTATTGGGCTTTGAATTGAAGAAACCTGTGATATATCAGTTATGTGCATGCTCTGATACATCTGGTCCTACTATGAGATACTTGAGAACCAGCCAGGACTTCTTATTTTCTCAGTTGCAACATTTACCATTTTCTAACAAAGATGGGGAAGGAGGAATAGAAGATGAAAATAGGTCTGTCTCTGGGTTCCTGCACTTTGACACTGCTACAAAAGTACGTCGAAAAATTCTCAGTATTCTCGACTCCATTGACTTCAGTCAGGAGATCCCCGAGCCTTTGCAATTGGATTTCTTTGATCGGGCCCAGATTGAACAAGTTATTGCTAACTGTGAACACAAGAATTTACGGGGACAGACAGTCTGCAATGTCAAGCTTCTTCATAGAGTTCTTGTAGCCGAAGTAAATGCCCTTCAGGGTATGGCAGCCATAGGACAGAGACCTCTACTAATGGAGGAAATCAGCACTATACTTCAGTACGTGGTAGGAAGAAACAAATTGTTGCAGTGTCTTCATGCAAAACGGCATGCTCTGGAGTCTTGGAGGCAGCTGGTAGAAATTATACTGACAGCTTGCCCTCAGGACCTCATTCAGGCAGAGGATCGACAACTGATTATTCGTGATATTTTACAAGATGTGCATGATAAGGTGACATGCTTCATAAGTTACTTTATACTGCCAAACGAATATTTATATCATTTAAACATATAG

Related Sequences

bmy_10384T0 SequenceType object (3)

Length: 1243 aa      View alignments
>bmy_10384T0
MATLLAVNSAASLWGPYKDIWQTVGNALWRRQPEAVHLLDMILKKHKPDFISLFRNPPKNVQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAFILSDLFDIGELAAVELLLAGEHQQPHFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRRGKTWTLELSPELVSMTTRFTDELMEQGLTYKVLTLVSQIDVNNEFEKLQRERGLGSEKHRKEARVSDLIKECRQSLAESLFAWACQSPLGKDDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDMIHQLPLLTERQYIATIHSRLQDSQPWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAMAELAIADSVFLFLTESVVVSENFYQEEFYIRRIHNLITDFLALMPMKVKQLRNRADEDARMIHMSMQMGNEPPISLRRDLEQLMLLIGELYKKNPFNLELALEYWCPSEPLQTSTILGSYLGVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSSHVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAFLQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIAASLWQSLEYTQILQTVRVPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFPSNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLAVFYKLLRDYEPQLEDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKKHLERAVQHCLALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIARYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSVSQKLMAGFVECLDSEDTEEFVRLEEGSELEKKLAGIHHETRIHILNLLITSLERNPPNLALYLLGFELKKPVIYQLCACSDTSGPTMRYLRTSQDFLFSQLQHLPFSNKDGEGGIEDENRSVSGFLHFDTATKVRRKILSILDSIDFSQEIPEPLQLDFFDRAQIEQVIANCEHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHDKVTCFISYFILPNEYLYHLNI*