Part of scaffold_549 (Scaffold)

For more information consult the page for scaffold_549 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST18 ENSTTRG00000015387 (Bottlenosed dolphin)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014582, Bottlenosed dolphin)

Protein Percentage 79.59%
cDNA percentage 81.96%
Ka/Ks Ratio 0.47747 (Ka = 0.1003, Ks = 0.2101)

ST18 ENSBTAG00000005560 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007308, Cow)

Protein Percentage 73.96%
cDNA percentage 78.74%
Ka/Ks Ratio 0.38294 (Ka = 0.194, Ks = 0.5065)

ST18  (Minke Whale)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene match (Identifier: BACU002343, Minke Whale)

Protein Percentage 83.68%
cDNA percentage 86.68%
Ka/Ks Ratio 0.53576 (Ka = 0.1266, Ks = 0.2362)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2193 bp    Location:272089..298014   Strand:+
>bmy_10404
ATGTTCTTAATCCGTCTCCGTTACTGCAGCGCGGCGCACGACTGCTCCACGGGCAAGAAGAGGAGAGCCGGGGAGCAGGCTTTGGGGGTGCCGGTCAACAAGAGAAAGTCCCTGCTCATGAAGCCCCGACACTACAGCCCCAGCGCAGACTGCGAGGAGGGACGGGCTGAGAGGACGGCGGAGGCCTTGGGGCAGGACGGCCCCCCGGAGACCCACCACCACCCCGGCGCAGAAATCATGATAAAACCCATGGAGGAGAAGCTTCCTTCAACTGCACAAGAAAATTCCGATGGGAAGGAAGACAGATACGGCCGTTATCAAGAGCTCGTGGTCAAATCACTAATGCATTTGGGGAAATTTGAAAAAAATGCATCTGTTCAGACCATAAGTGAGAACTTAAATGACAGTGGCATCCAGTCTCTAAAAGCAGAGGGGGATGAAGTGGATGAGTGCTTTATGGTTCATTCCGACGATGGAAAAGACAAAATCGATGATTCGCAGCTGCGGTTCTGCTCCTCCGACGACAATGAAAGTAACTCTGAAAGTGCAGAGAATGGTTGGGACAGCGACTCCAACTTCTCAGAAGAAACCAAACCTCAGAGCATCCCAAAGTATGTTCTAGTGGATGATAGGAAAGACCTACTGGAAGTTCCTGAAATAAAAACTGAAGGTGACAAGTTTATCTCTTGCGAAAGCACGTGTGATTCGGAAACAGAAAGGAGAGACCCACAGAACGCTCCCGTGGACCCGTCAGATGGCCAAGCCCAGCCCTCGTTCCCTGGGAGTAAGGAGGATGATCGCAGCCACGGGTGTCCGGCCGCGGGGGTGGAGGAAGCCGCTGCCCTGGAGAAAGCCAAGGGGAACTTGAGTTTGCTGGAGCAGGCGATCGCCCTGCAGGCTGAGCGAGGCTGTGTTTTCCACAGCACCTACAAGGAGCTAGACAGGTTTCTGCTGGAGCATCTCTCGGGGGAGAGGAGGCAAACCAAAGTCATTGACGTGGGCGGAAGACAAGTCTTTACCAATAAACATTCACCGAGGCCTGAAAAGAGGGAGACCAAGTGCCCCATCCCCGGGTGCGACGGCACAGGGCACGTGACAGGGCTGTACCCTCACCACCGCAGCCTTTCAGGGTGCCCTCACAAAGTGCGGGTTCCCCTGGAGATTCTTGCCATGCATGAAAATGTGCTCAAGTGCCCCACCCCGGGATGCACAGGACGAGGGCATGTGAACAGCAACCGCAACACGCACAGGAGTCTTTCTGGTTGTCCAATTGCTGCAGCTGAAAAATTGGCAATGTCCCAGGACAAAAGTCAGCTTGATTCTGCCAAAACCGGGCAGTGTCCTGACCAGGGTCACAGGACAAGCTTGGTGAAGCAAATCGAATTCAATTTCCGATCACAAGCCATCATCTCTCCCAGAGCTACGGTGTCAAAAGAGCAAGAGAAATTTGGAAAAGTACCTTTCGATTATGCCAGTTTCGATGCCCAGGTTTTTGGTAAACATCCCCTCGTACAAACAGGTCAAGGCCGAAAAACACCACCATTTCCTGAATCGAAGCATTTTTCCAATCCAGGGAAATTTCCTAACCGGCTGCTGAGTGCGGGCATCCACACACCGAGCCCCGGCCGTGCCAGCTCTCACAGCCACGGTCAGCGCGGCGAAGACACCCACGTAGCGGCAGCTGCTGCCATCCTGAACCTCTCCACCCGCTGCAGGGAAGCCGCAGACATCCTCTCCAACAAACCGCAGAGTCTGCCTGCCAAGAAAAACACACTGCCTCAAAAATATAAAGAAAATGCCAAGCTCTCCAAAATCACAGGCAGAAATTATGGATATTCTGATATACAGCTTAGCCCAAGAGGAGAACAAATTACAGATCATGTGCAGGAGCATGACCTTGTCAAAATCAAGCCAAAGGACACTAACCTTGAGATTGCCTTCATCCACTGGTCGGAACTAATACAGATTGTTTTTCATGCTGTGTGCAGACTCACAGCTGACTCCAGGTTTATTGGGAGACCTGAATCCGTGATTTTCAAAATCCCTACTCTTCTGGAAGATAAGGGGGTGGAGGCAGACTTCAAAGATGCAAGAGAACATCTTCTAAAGACAGTGAAGGACGATAGGCACATTCCAAAGTGTTCTCCTCCTTCCAAAGTTTCTCAGCCTGAGCATCTGCCCACCCAGCACTAA

Related Sequences

bmy_10404T0 Protein

Length: 731 aa      View alignments
>bmy_10404T0
MFLIRLRYCSAAHDCSTGKKRRAGEQALGVPVNKRKSLLMKPRHYSPSADCEEGRAERTAEALGQDGPPETHHHPGAEIMIKPMEEKLPSTAQENSDGKEDRYGRYQELVVKSLMHLGKFEKNASVQTISENLNDSGIQSLKAEGDEVDECFMVHSDDGKDKIDDSQLRFCSSDDNESNSESAENGWDSDSNFSEETKPQSIPKYVLVDDRKDLLEVPEIKTEGDKFISCESTCDSETERRDPQNAPVDPSDGQAQPSFPGSKEDDRSHGCPAAGVEEAAALEKAKGNLSLLEQAIALQAERGCVFHSTYKELDRFLLEHLSGERRQTKVIDVGGRQVFTNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKSQLDSAKTGQCPDQGHRTSLVKQIEFNFRSQAIISPRATVSKEQEKFGKVPFDYASFDAQVFGKHPLVQTGQGRKTPPFPESKHFSNPGKFPNRLLSAGIHTPSPGRASSHSHGQRGEDTHVAAAAAILNLSTRCREAADILSNKPQSLPAKKNTLPQKYKENAKLSKITGRNYGYSDIQLSPRGEQITDHVQEHDLVKIKPKDTNLEIAFIHWSELIQIVFHAVCRLTADSRFIGRPESVIFKIPTLLEDKGVEADFKDAREHLLKTVKDDRHIPKCSPPSKVSQPEHLPTQH*