Sequence detailsbmy_10404 (Coding sequence)

Part of scaffold_549 (SequenceType object (1))

For more information consult the page for scaffold_549 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST18ENSTTRG00000015387 (Bottlenosed dolphin)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014582, Bottlenosed dolphin)

Protein Percentage 79.59%
cDNA percentage 81.96%
Ka/Ks Ratio 0.47747 (Ka = 0.1003, Ks = 0.2101)

ST18ENSBTAG00000005560 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007308, Cow)

Protein Percentage 73.96%
cDNA percentage 78.74%
Ka/Ks Ratio 0.38294 (Ka = 0.194, Ks = 0.5065)

ST18 (Minke Whale)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene match (Identifier: BACU002343, Minke Whale)

Protein Percentage 83.68%
cDNA percentage 86.68%
Ka/Ks Ratio 0.53576 (Ka = 0.1266, Ks = 0.2362)

Additional orthologs identified in other species via the OPTIC pipeline.

ST18 (Human)   St18 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2193 bp    Location:272089..298014   Strand:+
Raw sequence 
>bmy_10404
ATGTTCTTAATCCGTCTCCGTTACTGCAGCGCGGCGCACGACTGCTCCACGGGCAAGAAGAGGAGAGCCGGGGAGCAGGCTTTGGGGGTGCCGGTCAACAAGAGAAAGTCCCTGCTCATGAAGCCCCGACACTACAGCCCCAGCGCAGACTGCGAGGAGGGACGGGCTGAGAGGACGGCGGAGGCCTTGGGGCAGGACGGCCCCCCGGAGACCCACCACCACCCCGGCGCAGAAATCATGATAAAACCCATGGAGGAGAAGCTTCCTTCAACTGCACAAGAAAATTCCGATGGGAAGGAAGACAGATACGGCCGTTATCAAGAGCTCGTGGTCAAATCACTAATGCATTTGGGGAAATTTGAAAAAAATGCATCTGTTCAGACCATAAGTGAGAACTTAAATGACAGTGGCATCCAGTCTCTAAAAGCAGAGGGGGATGAAGTGGATGAGTGCTTTATGGTTCATTCCGACGATGGAAAAGACAAAATCGATGATTCGCAGCTGCGGTTCTGCTCCTCCGACGACAATGAAAGTAACTCTGAAAGTGCAGAGAATGGTTGGGACAGCGACTCCAACTTCTCAGAAGAAACCAAACCTCAGAGCATCCCAAAGTATGTTCTAGTGGATGATAGGAAAGACCTACTGGAAGTTCCTGAAATAAAAACTGAAGGTGACAAGTTTATCTCTTGCGAAAGCACGTGTGATTCGGAAACAGAAAGGAGAGACCCACAGAACGCTCCCGTGGACCCGTCAGATGGCCAAGCCCAGCCCTCGTTCCCTGGGAGTAAGGAGGATGATCGCAGCCACGGGTGTCCGGCCGCGGGGGTGGAGGAAGCCGCTGCCCTGGAGAAAGCCAAGGGGAACTTGAGTTTGCTGGAGCAGGCGATCGCCCTGCAGGCTGAGCGAGGCTGTGTTTTCCACAGCACCTACAAGGAGCTAGACAGGTTTCTGCTGGAGCATCTCTCGGGGGAGAGGAGGCAAACCAAAGTCATTGACGTGGGCGGAAGACAAGTCTTTACCAATAAACATTCACCGAGGCCTGAAAAGAGGGAGACCAAGTGCCCCATCCCCGGGTGCGACGGCACAGGGCACGTGACAGGGCTGTACCCTCACCACCGCAGCCTTTCAGGGTGCCCTCACAAAGTGCGGGTTCCCCTGGAGATTCTTGCCATGCATGAAAATGTGCTCAAGTGCCCCACCCCGGGATGCACAGGACGAGGGCATGTGAACAGCAACCGCAACACGCACAGGAGTCTTTCTGGTTGTCCAATTGCTGCAGCTGAAAAATTGGCAATGTCCCAGGACAAAAGTCAGCTTGATTCTGCCAAAACCGGGCAGTGTCCTGACCAGGGTCACAGGACAAGCTTGGTGAAGCAAATCGAATTCAATTTCCGATCACAAGCCATCATCTCTCCCAGAGCTACGGTGTCAAAAGAGCAAGAGAAATTTGGAAAAGTACCTTTCGATTATGCCAGTTTCGATGCCCAGGTTTTTGGTAAACATCCCCTCGTACAAACAGGTCAAGGCCGAAAAACACCACCATTTCCTGAATCGAAGCATTTTTCCAATCCAGGGAAATTTCCTAACCGGCTGCTGAGTGCGGGCATCCACACACCGAGCCCCGGCCGTGCCAGCTCTCACAGCCACGGTCAGCGCGGCGAAGACACCCACGTAGCGGCAGCTGCTGCCATCCTGAACCTCTCCACCCGCTGCAGGGAAGCCGCAGACATCCTCTCCAACAAACCGCAGAGTCTGCCTGCCAAGAAAAACACACTGCCTCAAAAATATAAAGAAAATGCCAAGCTCTCCAAAATCACAGGCAGAAATTATGGATATTCTGATATACAGCTTAGCCCAAGAGGAGAACAAATTACAGATCATGTGCAGGAGCATGACCTTGTCAAAATCAAGCCAAAGGACACTAACCTTGAGATTGCCTTCATCCACTGGTCGGAACTAATACAGATTGTTTTTCATGCTGTGTGCAGACTCACAGCTGACTCCAGGTTTATTGGGAGACCTGAATCCGTGATTTTCAAAATCCCTACTCTTCTGGAAGATAAGGGGGTGGAGGCAGACTTCAAAGATGCAAGAGAACATCTTCTAAAGACAGTGAAGGACGATAGGCACATTCCAAAGTGTTCTCCTCCTTCCAAAGTTTCTCAGCCTGAGCATCTGCCCACCCAGCACTAA

Related Sequences

bmy_10404T0 SequenceType object (3)

Length: 731 aa      View alignments
>bmy_10404T0
MFLIRLRYCSAAHDCSTGKKRRAGEQALGVPVNKRKSLLMKPRHYSPSADCEEGRAERTAEALGQDGPPETHHHPGAEIMIKPMEEKLPSTAQENSDGKEDRYGRYQELVVKSLMHLGKFEKNASVQTISENLNDSGIQSLKAEGDEVDECFMVHSDDGKDKIDDSQLRFCSSDDNESNSESAENGWDSDSNFSEETKPQSIPKYVLVDDRKDLLEVPEIKTEGDKFISCESTCDSETERRDPQNAPVDPSDGQAQPSFPGSKEDDRSHGCPAAGVEEAAALEKAKGNLSLLEQAIALQAERGCVFHSTYKELDRFLLEHLSGERRQTKVIDVGGRQVFTNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKSQLDSAKTGQCPDQGHRTSLVKQIEFNFRSQAIISPRATVSKEQEKFGKVPFDYASFDAQVFGKHPLVQTGQGRKTPPFPESKHFSNPGKFPNRLLSAGIHTPSPGRASSHSHGQRGEDTHVAAAAAILNLSTRCREAADILSNKPQSLPAKKNTLPQKYKENAKLSKITGRNYGYSDIQLSPRGEQITDHVQEHDLVKIKPKDTNLEIAFIHWSELIQIVFHAVCRLTADSRFIGRPESVIFKIPTLLEDKGVEADFKDAREHLLKTVKDDRHIPKCSPPSKVSQPEHLPTQH*