Sequence details bmy_10411 (Coding sequence)

Part of scaffold_534 (Scaffold)

For more information consult the page for scaffold_534 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MAGEF1 ENSTTRG00000002234 (Bottlenosed dolphin)

Gene Details

melanoma antigen family F, 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002088, Bottlenosed dolphin)

Protein Percentage 90.67%
cDNA percentage 95.56%
Ka/Ks Ratio 0.85663 (Ka = 0.0456, Ks = 0.0533)

BT.66399 ENSBTAG00000019014 (Cow)

Gene Details

melanoma-associated antigen F1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025309, Cow)

Protein Percentage 85.63%
cDNA percentage 91.46%
Ka/Ks Ratio 0.4177 (Ka = 0.0678, Ks = 0.1622)

Additional orthologs identified in other species via the OPTIC pipeline.

MAGEF1 (Human)  

Genome Location

Sequence Coding sequence

Length: 483 bp    Location:307647..308129   Strand:+
Raw sequence 
>bmy_10411
ATGTTGCAGAAACCAGAGAGCGGGGGTCTCCCTATCCCTCAGGCGGAGGGGGAGATGGATGGTGGCCACGACAGTGAGACCCAGGCCCTGACCGCCTCGCAGGAGGTGGCCCCGAGCCCCCTCCYCCGAGAGAGCCCCGAGGAGGACCTTGGCGCTGTAAGGGAGGAGGGGGCTGCGGAGCCCTCCATCACCCTGAAAGGTGCGAGGGCTTTGGCAGCCAAAACCTCGGCCCGGCGCAGGGCCTGCCTCCGTCTGGATCAGACGGTGACCGAGTTGGTGCAGTTTCTGCTGGTGAAGGACAGGAAGAAGAGTCCCATCACCCTCTCCGAGATGGTGAAATACATTATCAGAGACTTAAAGGATCTGTTCCCTGAGATCATCGCAAGGGCCGCAGAGCATCTGCGGTATGTCTTTGGTTTCAAGCTGAAACAGCTTGACCGCAAGCACCACACTTACATCCTGATTAGCAAACTAAAACCTTGA

Related Sequences

bmy_10411T0 Protein

Length: 161 aa      View alignments
>bmy_10411T0
MLQKPESGGLPIPQAEGEMDGGHDSETQALTASQEVAPSPLXRESPEEDLGAVREEGAAEPSITLKGARALAAKTSARRRACLRLDQTVTELVQFLLVKDRKKSPITLSEMVKYIIRDLKDLFPEIIARAAEHLRYVFGFKLKQLDRKHHTYILISKLKP*