Sequence details bmy_10417 (Coding sequence)

Part of scaffold_534 (Scaffold)

For more information consult the page for scaffold_534 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLCN2 ENSTTRG00000011253 (Bottlenosed dolphin)

Gene Details

chloride channel, voltage-sensitive 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010669, Bottlenosed dolphin)

Protein Percentage 94.68%
cDNA percentage 94.31%
Ka/Ks Ratio 0.20617 (Ka = 0.012, Ks = 0.058)

BT.76984 ENSBTAG00000012284 (Cow)

Gene Details

chloride channel protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016291, Cow)

Protein Percentage 95.49%
cDNA percentage 93.27%
Ka/Ks Ratio 0.10667 (Ka = 0.0251, Ks = 0.2355)

CLCN2  (Minke Whale)

Gene Details

chloride channel, voltage-sensitive 2

External Links

Gene match (Identifier: BACU016566, Minke Whale)

Protein Percentage 98.4%
cDNA percentage 98.21%
Ka/Ks Ratio 0.2645 (Ka = 0.011, Ks = 0.0416)

Additional orthologs identified in other species via the OPTIC pipeline.

CLCN2 (Human)   Clcn2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2664 bp    Location:648082..661917   Strand:+
Raw sequence 
>bmy_10417
ATGGCGGCGGCGGCGGGGGCGGCGGCGGCGGAGGAAGGGATGGAGCCACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGGCCGGTATACTCAGGACCTTGGGGCCTTTGCCAAAGAGGAAGCTGCTCGGATCCGTCTAGGAGGGCCCGAGCCCTGGAGGGGTCCACCTTCCCCTCGGGCTGCCCCAGAGCTTCTGGAATACGGACAGAGCCGTTGCACCCGATGCCGTATCTGTACTGTACACTGCCATAAGTTCCTAGTGTCCAGGGTTGGTGAAGACTGGATCTTCCTGGTCCTGCTGGGGCTCCTCATGGCACTGGTCAGCTGGGCCATGGACTATGCCATCGCTGCTTGTCTGCAGGCTCAGCAGTGGATGTCCCGGGGCTTGAACACTAACCTCTTACTCCAGTATCTGGCCTGGGTCACCTACCCCGTCGTCCTCATCACTTTCTCTGCCGGATTCACACAGATCCTGGCTCCTCAGGCTGTCGGGTCCGGCATCCCCGAGATGAAGACCATCTTGCGGGGAGTGGTGCTCAAGGAATACCTCACCCTCAAGACCTTCGTAGCTAAGGTTATCGGGCTGACCTGTGCCCTCGGCAGTGGGATGCCCCTTGGCAAAGAGGGCCCTTTTGTGCATATCGCAAGCATGTGTGCTGCTCTCCTCAGCAAGTTCCTCTCCCTGTTCGGGGGCATCTATGAGAACGAATCCCGGAACACAGAGATGCTGGCCGCCGCCTGTGCCGTGGGAGTGGGCTGCTGCTTTGCGGCACCCATTGGAGGTGTGCTCTTCAGCATTGAGGTCACCTCTACCTTCTTCGCTGTGCGGAACTACTGGCGGGGCTTCTTTGCTGCCACCTTCAGTGCCTTCATCTTCCGGGTCTTGGCAGTCTGGAACCGTGATGAAGAGACCATTACGGCTCTCTTCAAAACCCGGTTCCGGCTTGACTTCCCCTTCGACCTCCAGGAGCTGCCGGCCTTTGCTGTCATTGGTATTGCAAGTGGCTTCGGGGGAGCGCTCTTTGTCTACCTGAACCGCAAGATTGTCCAGGTGATGAGGAAGCAGAAGACCATCAACCGTTTCCTCATGAAGAAACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCTACTCTGACCTTCCCCCCTGGCTTTGGACAGTTCATGGCCGGACAGCTCTCACAGAAAGAGACACTGGTCACCCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGATGGAGGAGCTTGAGCCACCTGGAACCTCACAGGCCTGGAACCCACCACGCGCCAATTGTCCCTGCCCACCCCCTCCACTACCTGTTTCAATTCCCACCCCCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTGGGCGAAAGCATGGCTGCCTGGTTCCCAGACGGGATTCACACAGATGGCAGCACTTACCGGATCGTGCCGGGAGGCTATGCAGTGGTGGGGGCAGCTGCGCTGGCAGGAGCAGTGACACACACAGTGTCCACGGCCGTGATCGTGTTCGAGCTCACAGGCCAGATCGCCCACATCCTGCCTGTTATGATCGCCGTCATCCTGGCCAACGCCGTTGCCCAGAGCCTACAGCCCTCACTCTATGACAGCATCATCCGAATCAAGAAACTGCCCTATCTGCCTGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGAGTGGAGGACATCATGGTGCGGGATGTTCCCCACGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGGTTGGCACTGCACAGGACCAAGGGCCGCGTGCTGGCCCTAGTAGAGTCCCCTGAGTCCATGATCCTCCTGGGCTCCATCGAGTGCTCACAGGTGGTGGCATTGCTGGGGGCTCAGCTGAGCCCAGCCCGCCGGCGGCAGTACATGCAGGAGCATCGAGCTGCCCGGACCTCTTCACCCTCCGATCAGGAGAGTCCCCCCAGCCCTGAGACCTCCCTCCTCTTCCAGGTGAACACAGAAGACTCGGGCTTCCCTGCAGCACGGGGGGAGACTCACAAGCCCCTGAAGCCTGCTCTCAAGAGGGGGCCCAGCAACACCATGAACCTCAAGGAGAGTCCCACAGGGAACATGGAGCAGGCAGGCATCGCCCTCAGAAGCCTCTTCTGTGGCAGTCCGCCCCCCGAGCCTGCTTCAGAGTTGGAGAAGTCGGAAACATGTGACAAGCGCAAGCCGAAGCGGGTCCGAATTTCCTTGGCGAGTGACTCGGACCTGGAAGGCGAGATGACCCCTGAGGAGATTCTGGAGTGGGAGGAGCAGCAACTAGATGAACCTGTCAACTTCAGTGACTGCAAAATTGACCCTGCCCCCTTCCAGCTGGTGGAGCGGACCTCTTTGCACAAGACTCACACCATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGAATTGTCACCCTAAAGGAGCTCCGGAAGGCTATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCCCCTTGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACAGAGACCACCGAGGTGCATGCACTCTGGGGGCCCCGCTCCCGCCACGGCCTCCCCCGGGAGGGCAGCCCTTCTGACAGCGACGACAAGTGCCAGTGA

Related Sequences

bmy_10417T0 Protein

Length: 888 aa      View alignments
>bmy_10417T0
MAAAAGAAAAEEGMEPRALQYEQTLMYGRYTQDLGAFAKEEAARIRLGGPEPWRGPPSPRAAPELLEYGQSRCTRCRICTVHCHKFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAACLQAQQWMSRGLNTNLLLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIGGVLFSIEVTSTFFAVRNYWRGFFAATFSAFIFRVLAVWNRDEETITALFKTRFRLDFPFDLQELPAFAVIGIASGFGGALFVYLNRKIVQVMRKQKTINRFLMKKRLLFPALVTLLISTLTFPPGFGQFMAGQLSQKETLVTLFDNRTWVRQGLMEELEPPGTSQAWNPPRANCPCPPPPLPVSIPTPLPEGAAFGRLVGESMAAWFPDGIHTDGSTYRIVPGGYAVVGAAALAGAVTHTVSTAVIVFELTGQIAHILPVMIAVILANAVAQSLQPSLYDSIIRIKKLPYLPELGWGRHQQYRVRVEDIMVRDVPHVALSCTFRDLRLALHRTKGRVLALVESPESMILLGSIECSQVVALLGAQLSPARRRQYMQEHRAARTSSPSDQESPPSPETSLLFQVNTEDSGFPAARGETHKPLKPALKRGPSNTMNLKESPTGNMEQAGIALRSLFCGSPPPEPASELEKSETCDKRKPKRVRISLASDSDLEGEMTPEEILEWEEQQLDEPVNFSDCKIDPAPFQLVERTSLHKTHTIFSLLGVDHAYVTSIGRLIGIVTLKELRKAIEGSVTAQGVKVRPPLASFRDSATSSSDTETTEVHALWGPRSRHGLPREGSPSDSDDKCQ*