Part of scaffold_534 (Scaffold)

For more information consult the page for scaffold_534 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTR3C ENSTTRG00000000577 (Bottlenosed dolphin)

Gene Details

5-hydroxytryptamine (serotonin) receptor 3C, ionotropic

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000542, Bottlenosed dolphin)

Protein Percentage 61.31%
cDNA percentage 72.92%
Ka/Ks Ratio 0.47 (Ka = 0.2727, Ks = 0.5803)

HTR3C ENSBTAG00000016624 (Cow)

Gene Details

5-hydroxytryptamine receptor 3C precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022113, Cow)

Protein Percentage 75.13%
cDNA percentage 83.33%
Ka/Ks Ratio 0.46484 (Ka = 0.1579, Ks = 0.3397)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1203 bp    Location:891115..887192   Strand:-
>bmy_10430
TCTCTATTCTCTACAGGAAGGGCAAACACTTTCAGCATCAATTGTTCAGTCTTTGACCAGCGTGGGGTAGACCCTGCTGTCTTCCAGGCTATATTTAACCAGAAGGACTTCCGTCCAGTCATCAACTACAGCATCCCCACTCATATCAACATCTCCTTCACCCTGTCTGCCAGCCTCAAAGTGATCTGGAGTCACCCATTCATCAGCTGGGACCCAGAAGAATGTGGTGATATCAATAAACTCACCCTGACAGCTGAGAATCTGTGGCTCCGAGACATCTTCATCGTGGAATCCAACGATGTGGATCACACTCTGGATGGCCTCTCCGCCTGTGTGACTAATGAAGGTCGCGTTGTGTACAACAAACCGATGCAGGTGACCAGCATCTGTAGCCTGGACATCTACTTCTCTTTTGACCAGAAGAACTGCACCCTCACTTTTAGCTCTTTCCTCTACACAGTGTGGGAGATAACAGACACCTCGCGTGACACTGGCCACACACAAGGGGAGTGGGAGCTCCTGGGCATCAACAAGGCCACCCCGAAGATATCTGTGGGCTCCAGCCTTTTTGACCAGATCATGTTCTATGTAAGGCCAGAGATTCTGGCATGGCTGTCCATCCCCCATATCTTTCTCATCCTTTCTGATAGCCATCGACGCCCTCAGCTTCTACCTGCCGTAGAAAGTGAGAGCCGCGCCCCATTCAAGATGACACTCCTGCTGGGCTACAGCGTCTTCCTGCTCATGATGAATGACTTACTCCCTGCCAGTGGCACCTCCCTCATCGGTGTCTACTTTGCCCTGTGTCTGTCACTGATGGTGGTCAGCCTGCTGGAGACCATCTTCATCACCTACCTGCTGCACCCGGCCACCACCCAGCCCCCACCCATGCCTCGCTGCCTCCATCCCCTGCTTCTATACTGCACCAGCCCAARGAAATGCTGCCCTGCTGCTCTCTGGAAGGAGGATGTGGGCCTGGGCCTCACACCCACCCACCTGTCTGGACAGAAGGAGCCAGGGGAATTGGGAGGGAAGGAGCTGGGACCCAGAGGGGCAGAACTGAATGGTGGCTCAGGATGGACAAGGGCCCGGCTAGCTGACCTGTGGGTGCAGTTCAGCCACATGATGGACACCCTGCTCTTCCGCATCTACCTGCTTTTCTTGGCCACCTCCATCACTACGGTCATCATCCTCTGGAACACC

Related Sequences

bmy_10430T0 Protein

Length: 401 aa      View alignments
>bmy_10430T0
SLFSTGRANTFSINCSVFDQRGVDPAVFQAIFNQKDFRPVINYSIPTHINISFTLSASLKVIWSHPFISWDPEECGDINKLTLTAENLWLRDIFIVESNDVDHTLDGLSACVTNEGRVVYNKPMQVTSICSLDIYFSFDQKNCTLTFSSFLYTVWEITDTSRDTGHTQGEWELLGINKATPKISVGSSLFDQIMFYVRPEILAWLSIPHIFLILSDSHRRPQLLPAVESESRAPFKMTLLLGYSVFLLMMNDLLPASGTSLIGVYFALCLSLMVVSLLETIFITYLLHPATTQPPPMPRCLHPLLLYCTSPXKCCPAALWKEDVGLGLTPTHLSGQKEPGELGGKELGPRGAELNGGSGWTRARLADLWVQFSHMMDTLLFRIYLLFLATSITTVIILWNT