Part of scaffold_528 (Scaffold)

For more information consult the page for scaffold_528 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC3 ENSTTRG00000017081 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016193, Bottlenosed dolphin)

Protein Percentage 70.34%
cDNA percentage 70.06%
Ka/Ks Ratio 0.29511 (Ka = 0.0514, Ks = 0.1741)

ERCC3 ENSBTAG00000020777 (Cow)

Gene Details

TFIIH basal transcription factor complex helicase XPB subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027687, Cow)

Protein Percentage 94.93%
cDNA percentage 91.67%
Ka/Ks Ratio 0.11183 (Ka = 0.0349, Ks = 0.3123)

ERCC3  (Minke Whale)

Gene Details

excision repair cross-complementation group 3

External Links

Gene match (Identifier: BACU009906, Minke Whale)

Protein Percentage 95.78%
cDNA percentage 95.78%
Ka/Ks Ratio 0.38766 (Ka = 0.0332, Ks = 0.0857)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1776 bp    Location:45585..30735   Strand:-
>bmy_10438
AAGAAGAAGTCCAAGAAGCGGCACTACGAGGATGAGGAAGACGATGAAGACGACGCCCCTGGGAACGAGTCTCAGGAAGCGGTTCCCTCGGCGGCCGGGAAGCAGGTGGATGAGTCCGGCACCAAAGTGGATGAGTATGGAGCCAAGGACTACAGGCTGCAGATGCCGCTGAAGGACGACCACACCTCCAGGCCCCTGTGGGTGGCTCCTGATGGCCACATCTTCTTAGAAGCCTTCTCTCCAGTTTACAAATATGCTCAAGACTTCCTGGTGGCTATTGCAGAGCCGGTGTGCCGACCAACCCACGTGCATGAGTACAAACTAACCGCCTACTCCCTGTACGCAGCTGTCAGCGTTGGGCTGCAAACTAGTGACATCACTGAGTACCTCAGGAAGCTCAGCAAGACGGGATTATGTACTGTCAGCTATGGGAAAGTCAAGCTGGTCCTGAAGCACAACAGGTACTTCGTTGAAAGTTCTCACCCTGATGTCATCCAGCATCTTCTCCAGGATCCCATGATCCGGGAATGCCGCCTGAGGAACTCTGAGGGGGAGGCCACCGAGCTCATCACAGAGACTTTCACCAGCARATCTGCCATCGCTAAGAGTGCTGAAGGCAGCGGTGGGCCGTCCACTTCCCGGGTGACAGATCCACAGGGTAAATGTGACATCCCCACGGACCTGTTTGACTTTTATGAGCAAATGGACAAGGATGAGGAGGAAGAAGAAGAGACACAGACCGTATCTTTTGAAGTCAAGCAGGAAATGATTGAGGAACTCCAGAAACGTTGCATCCACCTGGAGTACCCTCTGTTGGCAGAATACGACTTCCGGAATGATTCTGTCAACCCTGACATCAACATTGACCTGAAACCCACAGCTGTCCTTAGACCTTATCAGGAGAAGAGCTTGCGGAAGATGTTTGGGAATGGGCGCGCACGTTCCGGGGTCATCGTCCTTCCTTGTGGTGCTGGGAAGTCCCTGGTTGGCGTGACAGCTGCGTGYACAGTCAGAAAGCGCTGCCTGGTGCTGGGCAACTCAGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTCAAGATGTGGTCCACCATCGACGACAGCCAGATCTGCCGCTTTACCTCCGACGCCAAGGACAAGCCCATAGGCTGCTCCATTGCCATCAGCACCTACTCCATGCTGGGCCACACCACCAAAAGGTCCTGGGAGGCCGAGCGGGTGATGGAGTGGCTCAAAACTCAGGAGTGGGGCCTCATGATCCTGGACGAAGTACACACCATACCAGCCAAGATGTTCCGACGGGTGCTCACCATCGTGCAGGCCCACTGCAAACTGGGCTTGACCGCAACCCTCGTCCGGGAAGATGACAAAATTGTCGACTTAAATTTTCTGATTGGGCCCAAGCTCTATGAAGCCAACTGGATGGAGCTGCAGAACAACGGCTACATCGCCAAAGTCCAGTGCGCTGAGGTTTGGTGCCCGATGTCTCCTGAGTTTTACCGGGAGTATGTGGCAATCAAAACCAAGAAACGAATCTTGCTGTACACCATGAACCCCAACAAATTCAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGACAAGATTATTGTTTTTGCTGACAACGTGTTTGCTCTGAAGGAATATGCCATTCGACTGAACAAAAAGGAGGAAGAGGCCGGTGCTTCTGTGCACAGTGATGCAGGGCTTCAGGTGCTGCGAGTGGAGCAGAAGGCAAGGTCCTCTGAGAAGATGAGCCTTCGTTCGTTA

Related Sequences

bmy_10438T0 Protein

Length: 592 aa      View alignments
>bmy_10438T0
KKKSKKRHYEDEEDDEDDAPGNESQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGLCTVSYGKVKLVLKHNRYFVESSHPDVIQHLLQDPMIRECRLRNSEGEATELITETFTSXSAIAKSAEGSGGPSTSRVTDPQGKCDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKKEEEAGASVHSDAGLQVLRVEQKARSSEKMSLRSL