Sequence detailsbmy_10449 (Coding sequence)

Part of scaffold_528 (SequenceType object (1))

For more information consult the page for scaffold_528 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLR2DENSTTRG00000010055 (Bottlenosed dolphin)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide D

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009533, Bottlenosed dolphin)

Protein Percentage 92.65%
cDNA percentage 92.16%
Ka/Ks Ratio 0.23621 (Ka = 0.0523, Ks = 0.2216)

POLR2DENSBTAG00000010225 (Cow)

Gene Details

DNA-directed RNA polymerase II subunit RPB4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013496, Cow)

Protein Percentage 91.4%
cDNA percentage 86.02%
Ka/Ks Ratio 0.07251 (Ka = 0.0486, Ks = 0.6696)

Additional orthologs identified in other species via the OPTIC pipeline.

POLR2D (Human)   Polr2d (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 408 bp    Location:615840..613133   Strand:-
Raw sequence 
>bmy_10449
ATGGCGGCCGSTGGCAGTGATCCGCGGGCTGGCGACGTAGAGGAGGACGCCTCACAGCTCATCTTTCCCAAAGGTGCGGCCTGGGTCTGCCGGACTGCCCCCGTGGTCCTGCGTGGTCGCCGCAGGCCTGGGCAGGCGCGGCGAAGGGCAGGGAGGAGGGGGATGCGGGCCGGCAGGGCAAGGTACTGGAAAACACAAAAGTTTGAAACAGCTGAGACACTTCTAAATTCAGAAGTTCATATGCTTCTGGAGCATCGAAAGCAACAAAATGAGAGTGCAGAGGATGAACAGGAACTTTCTGAGGTCTTCATGAAAACTTTAAACTACACAGCCCGTTTCAGTCGTTTCAAAAACAGAGAGACCATTGCCAGTGTACGTAGTGGGCTTATTTATTTATTATTTCCCTGA

Related Sequences

bmy_10449T0 SequenceType object (3)

Length: 136 aa      View alignments
>bmy_10449T0
MAAXGSDPRAGDVEEDASQLIFPKGAAWVCRTAPVVLRGRRRPGQARRRAGRRGMRAGRARYWKTQKFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASVRSGLIYLLFP*