Part of scaffold_528 (Scaffold)

For more information consult the page for scaffold_528 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HS6ST1 ENSTTRG00000015196 (Bottlenosed dolphin)

Gene Details

heparan sulfate 6-O-sulfotransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014407, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 96.76%
Ka/Ks Ratio 0.09441 (Ka = 0.0183, Ks = 0.1939)

HS6ST1 ENSBTAG00000006157 (Cow)

Gene Details

heparan-sulfate 6-O-sulfotransferase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008098, Cow)

Protein Percentage 87.46%
cDNA percentage 88.89%
Ka/Ks Ratio 0.09265 (Ka = 0.0713, Ks = 0.7701)

HS6ST1  (Minke Whale)

Gene Details

heparan sulfate 6-O-sulfotransferase 1

External Links

Gene match (Identifier: BACU009918, Minke Whale)

Protein Percentage 98.51%
cDNA percentage 99.17%
Ka/Ks Ratio 0.05551 (Ka = 0.0052, Ks = 0.0928)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 840 bp    Location:975254..972538   Strand:-
>bmy_10457
ATGGCCCTGCTTAGCGCACACACAGGAACCAGCTCCCCGCGGCCCCCTTCCTACCGCAGGTGGTCCCTGCGTGCCCCACCCCTGCCTGGCGCCCCGGCCTCACCTCCCCCCCGCTCCCCGTCTCGTTGCAGGAAGTTCTACTACATCACCCTGCTGCGAGACCCCGTGTCCCGCTACCTGAGCGAGTGGCGGCACGTGCAGCGGGGGGCCACGTGGAAGACGTCGCTGCACATGTGCGACGGGCGCACGCCCACGCCCGAGGAGCTGCCGCCCTGCTACGAGGGCACTGACTGGTCGGGCTGCACGCTGCAGGAGTTCATGGACTGCCCCTACAACCTGGCCAGCAACCGCCAGGTGCGCATGCTGGCCGACCTCAGCCTGGTGGGCTGCTACAACCTGTCCTTCATCCCCGAGGGCAAGCGGGCCCAGCTGCTGCTGGACAGCGCCAAGAAGAACCTGCGGGGCATGGCCTTCTTCGGCCTGACCGAGTTCCAGCGCAAGACGCAGTACCTGTTCGAGCGGACGTTCAACCTCAAGTTCATCCGTCCCTTCATGCAGTACAACAGCACGCGGGCGGGCGGCGTGGAGGTGGGCGAGGACACCATCCGGCGCATCGAGGAGCTCAACGACCTGGACATGCAGCTCTACGACTACGCCAGGGACCTCTTCCAGCAGCGCTACCAGTACAGGCGGCAGCTGGAGCGCCGGCAGCAGCGCCTCCGGAACCGCGAGGAGCGCCTGCTGCACCGGGCCAAGGAGGCGCCGCCGCGGGGGGGCGCCGAGGAGCCCGGCCGCGTGCCCACCGAGGACTACATGAGCCACATCATCGAGAAGTGGTAG

Related Sequences

bmy_10457T0 Protein

Length: 280 aa      View alignments
>bmy_10457T0
MALLSAHTGTSSPRPPSYRRWSLRAPPLPGAPASPPPRSPSRCRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPYNLASNRQVRMLADLSLVGCYNLSFIPEGKRAQLLLDSAKKNLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVGEDTIRRIEELNDLDMQLYDYARDLFQQRYQYRRQLERRQQRLRNREERLLHRAKEAPPRGGAEEPGRVPTEDYMSHIIEKW*