Sequence detailsbmy_10476 (Coding sequence)

Part of scaffold_553 (SequenceType object (1))

For more information consult the page for scaffold_553 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBL1YENSTTRG00000008100 (Bottlenosed dolphin)

Gene Details

transducin (beta)-like 1, Y-linked

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007662, Bottlenosed dolphin)

Protein Percentage 88.71%
cDNA percentage 87.34%
Ka/Ks Ratio 0.14585 (Ka = 0.0276, Ks = 0.189)

TBL1XENSBTAG00000018112 (Cow)

Gene Details

F-box-like/WD repeat-containing protein TBL1X

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024105, Cow)

Protein Percentage 87.5%
cDNA percentage 82.39%
Ka/Ks Ratio 0.05129 (Ka = 0.0297, Ks = 0.5787)

Additional orthologs identified in other species via the OPTIC pipeline.

TBL1X (Human)   Tbl1x (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1788 bp    Location:874800..898440   Strand:+
Raw sequence 
>bmy_10476
ATGAACGTCTCAGTGGCTGTGCCTTCCGCCCTCGGTCCAGGCTTCACAGAACCCTGGCCTCCCTGTCTCGTTGCAGGTTTTTCCCACTCGGCGTTCACATTCGGTATCGAGAGCCACATAAGCCAGTCCAACATCAATGGGACTCTAGTGCCGCCGGCTGCCCTCATCTCCATCCTGCAGAAGGGCCTGCAGTATGTGGAGGCCGAGATCAGCATCAACGAGGACGGCACGGTGTTTGACGGCCGCCCCATAGAGTCGCTGTCCCTGATCGACGCGGTGATGCCCGACGTGGTGCAGACGCGGCAGCAGGCCTTCCGAGAGAAGCTGGCGCAGCAGCAGGCCAGCGTGGCGGCCACGGCAGCGGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGGGCGGTGCATACGAGTCGACGTCCGGGGTTTGCTTCCTCCGTGGCGGGGGGGGGGGCTTCGTGCTCTGGGGGAAAACGGCCACTATCCAGGACCTGTGTCTTCCCCTGTTTCCTGTGACAGATAACCATTCGAAACCAATGGAGATAGACGGAGACGTGGAGATTCCACCCAACAAAGCCACAGTCCTTCGGGGCCATGAGTCTGAGGTGTTCATCTGTGCCTGGAACCCTGTCAGTGATCTCCTGGCTTCCGGATCTGGAGATTCGACCGCGAGGATATGGAACCTCAATGAAAACAGCAACGGGGGCTCCACGCAGCTCGTGCTGAGGCACTGTATACGGGAGGGGGGGCATGACGTCCCCAGTAACAAAGACGTGACCTCGCTGGACTGGAACAGTGACGGCACACTGTTGGCTACAGGTTCCTATGATGGTTTTGCGAGAATATGGACGGAAGACGGTAACCTGGCCAGCACCTTAGGCCAACATAAAGGCCCCATCTTTGCCTTGAAATGGAACAAGAAGGGGAATTACATTTTGAGTGCTGGAGTAGACAAAACAACAATAATTTGGGATGCCCACACAGGAGAGGCCAAACAGCAGTTTCCGTTTCATTCCGCCCCTGCCCTCGACGTGGATTGGCAGAACAACACTGCCTTCGCCTCCTGTAGCACAGACATGTGCATCCACGTCTGCAGACTCGGCTCTGACCGCCCGGTCAAGACGTTCCAGGGGCACACGAATGAGGTCAATGCCATCAAATGGGATCCTTCTGGGATGTTGCTAGCATCCTGCTCTGATGACATGACATTAAAGATCTGGAGTATGAAGCAGGATACGTGTGTCCATGACCTTCAAGCTCACAGCAAAGAGATATATACCATAAAGTGGAGTCCCACCGGGCCAGCCACCAGCAACCCAAACTCCAACATCATGCTAGCAAGTGCTTCGTTCGATTCTACAGTTCGACTGTGGGACGTGGAGCGGGGCGTTTGCATCCACACGCTCACCAAACACCAGGAACCGGTCTATAGTGTAGCTTTTAGCCCCGACGGGAAGCACTTGGCCAGCGGCTCCTTTGACAAGTGTGTGCACATCTGGAACACGCAGAGCGGAAGTCTCGTCCACAGCTACCGAGGCACCGGCGGCATCTTCGAGGTGTGCTGGAACGCCCGAGGGGACAAAGTGGGCGCCAGCGCGTCGGACGGCTCCGTGTGTGTCTTAGATCTGCGAAAGTAA

Related Sequences

bmy_10476T0 SequenceType object (3)

Length: 596 aa      View alignments
>bmy_10476T0
MNVSVAVPSALGPGFTEPWPPCLVAGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGGAYESTSGVCFLRGGGGGFVLWGKTATIQDLCLPLFPVTDNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTAFASCSTDMCIHVCRLGSDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKHLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK*