Part of scaffold_539 (Scaffold)

For more information consult the page for scaffold_539 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ADAMTS5 ENSTTRG00000004346 (Bottlenosed dolphin)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004090, Bottlenosed dolphin)

Protein Percentage 88.43%
cDNA percentage 88.14%
Ka/Ks Ratio 0.218 (Ka = 0.0247, Ks = 0.1132)

ADAMTS5 ENSBTAG00000000648 (Cow)

Gene Details

A disintegrin and metalloproteinase with thrombospondin motifs 5 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000849, Cow)

Protein Percentage 88.61%
cDNA percentage 84.76%
Ka/Ks Ratio 0.11709 (Ka = 0.0736, Ks = 0.6288)

ADAMTS5  (Minke Whale)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 5

External Links

Gene match (Identifier: BACU000106, Minke Whale)

Protein Percentage 89.32%
cDNA percentage 90.75%
Ka/Ks Ratio 0.47364 (Ka = 0.0806, Ks = 0.1701)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1689 bp    Location:609610..589315   Strand:-
>bmy_10482
ATGGACAAAGTTCCTGCCATTGGCATTCCGGAACCCAAGGGGAATGCATCGTCTCTTTTATGGCTACCTATTTACTTGGCCAAGAAAATGGAATGGATGGCGGGGGGAGGCAGGGAGATGCTCTCTGATCTCCTGCGGCTTATAGTTGATCAGAGAAGATGGAAAATTAGACAAGCATTCAAAATAATATGTAGACATCTACTTGGCCTCTCCCATGACGATTCCAAATTCTGTGAAGAAAATTTCGGTTCCACAGAAGATAAGCGCTTAATGTCTTCCATCCTAACCAGCATTGATGCATCCAAGCCCTGGTCCAAATGCACCTCAGCCACCATCACAGAATTCCTGGATGATGGCCATGGTAACTGTTTGCTAGACCTGCCACGCAAGCAGCTCCTGGGCCCCGAGGAACTCCCGGGACAGACCTACGATGCCAGCCAGCAGTGCAACCTGACCTTCGGGCCCGAGTACTCGGTGTGTCCCGGGATGGACGTGTGTGCCCGCCTCTGGTGTGCTGTGGTGCGCCAGGGCCAAATGGTGTGTCTGACCAAGAAGCTGCCAGCCGTGGAAGGGACACCATGTGGAAAAGGGAGGATCTGCCTGCAGGGCAAGTGTGTGGACAAGACCAAGAAAAAATATTATTCAACATCGAGCCATGGCAGCTGGGGATCCTGGGGRTCCTGGGGCCAGTGTTCTCGCTCATGTGGGGGAGGAGTACAGTTTGCCTATCGCCACTGCAATAACCCCGCGCCCAGAAACAATGGCCGTTACTGCACAGGGAAGAGGGCCATCTACCGCTCCTGCAGTGTCATACCCTGCCCGGCCAATGGTAAATCTTTTCGTCATGAGCAGTGTGAGGCCAAAAATGGATATCAGTCTGATGCAAAAGGAGTCAAAACATTTGTGGAATGGGTTCCCAAATATGCAGGTGTCCTGCCAGGAGATGTGACCGATGGAACGGAATGCAGGCCGTACAGCAATTCCGTCTGCGTCCGGGGAAAGTGTGTGAGGACGGGCTGTGACGGCATCATTGGCTCGAAGCTGCAGTATGACAAGTGCGGAGTGTGTGGAGGAGACAACTCCAGCTGCACAAAGGTGATTGGAACCTTCAATAAAAAAAGCAAGGGTTACACTGATGTTGTGAGGATCCCTGAAGGCGCGACTCACATAAAAGTCCGACAGTTCAAAGCCAAAGACCAGACTAGATTCACTGCCTACTTAGCCCTGAAGAAGAAAAACGGTGAGTACCTTATCAATGGAAAGTACATGATCTCCACTTCGGAAACCATCATTGACATCAATGGAACAGTCATGAACTACAGTGGTTGGAGCCACAGGGATGACTTCTTGCATGGGATGGGCTACTCAGCCACGAAGGAAATTCTAATCGTACAGATTCTTGCAACAGACCCAACTAAAGCCTTGGATGTCCGTTACAGTTTTTTTGTTCCCAAGAAGTCCACTCCAAAAGTAAACTCTGTCACTAGCGACAGCAGCAATAAAGTGGGATCACCCACTCCACAGCTGCAGTGGGTGACGGGCCCTTGGCTCGCCTGCTCTAGAACCTGTGACACGGGCTGGCACACCAGGACGGTGCAGTGCCAGGATGGAAACGGGAAGTTAGCGAAGGGATGTCTTCTCTCTCAGAGGCCTTCTGCATTTAAGCAATGCTCGCTAAAAAAATGTTAG

Related Sequences

bmy_10482T0 Protein

Length: 563 aa      View alignments
>bmy_10482T0
MDKVPAIGIPEPKGNASSLLWLPIYLAKKMEWMAGGGREMLSDLLRLIVDQRRWKIRQAFKIICRHLLGLSHDDSKFCEENFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQLLGPEELPGQTYDASQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSTSSHGSWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPRNNGRYCTGKRAIYRSCSVIPCPANGKSFRHEQCEAKNGYQSDAKGVKTFVEWVPKYAGVLPGDVTDGTECRPYSNSVCVRGKCVRTGCDGIIGSKLQYDKCGVCGGDNSSCTKVIGTFNKKSKGYTDVVRIPEGATHIKVRQFKAKDQTRFTAYLALKKKNGEYLINGKYMISTSETIIDINGTVMNYSGWSHRDDFLHGMGYSATKEILIVQILATDPTKALDVRYSFFVPKKSTPKVNSVTSDSSNKVGSPTPQLQWVTGPWLACSRTCDTGWHTRTVQCQDGNGKLAKGCLLSQRPSAFKQCSLKKC*