Part of scaffold_541 (Scaffold)

For more information consult the page for scaffold_541 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC17 ENSTTRG00000011640 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011042, Bottlenosed dolphin)

Protein Percentage 87.97%
cDNA percentage 87.74%
Ka/Ks Ratio 0.29135 (Ka = 0.0193, Ks = 0.0663)

TTC17 ENSBTAG00000031299 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053799, Cow)

Protein Percentage 97.46%
cDNA percentage 94.86%
Ka/Ks Ratio 0.08937 (Ka = 0.0162, Ks = 0.1811)

TTC17  (Minke Whale)

Gene Details

tetratricopeptide repeat domain 17

External Links

Gene match (Identifier: BACU008925, Minke Whale)

Protein Percentage 97.8%
cDNA percentage 97.57%
Ka/Ks Ratio 0.35391 (Ka = 0.0171, Ks = 0.0485)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location:930726..880473   Strand:-
>bmy_10491
ATGAACTTGAAGCATCCCCATGACTTAGTCATATTAATGAGACAAGAAACAACAGTTAACTACCTCAAAGAATTGGAGAAGCAATTAGTTGCTCAAAAAATTCATATAGAAGAGAATGAGGACAGGGATACAGGACTGGAACAGAGACATAATAAAGAGGATCCAGACTGCATCAAAGCCAAGGTACCCTTAGGGGACCTAGATCTGTATGATGGCACATACATAACTTTGGAGAGCAAAGATATCAGCCCTGAAGATTATATAGACACAGAATCTCCTGTCCCTCCAGACCCTGAGCAGCCTGATTGTACTAAAATTCTAGAACTTCCATATAGTATACATGCTTTTCAGCACTTGCGAGGTGTACAAGAGAGAGTTAATCTTTCTGCACCTCTACTACCTAAAGAAGATCCAATCTTCACATATCTATCTAAACGGTTAGGAAGGAGTATAGATGACATAGGTCACCTCATTCATGAAGGCCTACAGAAGAACTCTTCCTCGTGGGTACTATATAACATGGCTTCATTTTACTGGAGAATAAAGAATGAGCCGTATCAAGTAGTGGAATGTGCCATGCGAGCACTTCACTTCTCATCCAGGCACAATAAAGACATTGCCCTGGTCAACTTGGCGAATGTTCTGCACAGAGCACACTTCTCTGCTGATGCTGCTGTCGTGGTCCACGCAGCTCTGGACGACAGTGACTTCTTCACTAGCTATTACACTTTAGGAAATATATATGCAATGCTTGGGGAGTATAACCACTCAGTGCTCTGTTATGACCATGCTTTACAGGCTAAACCTGGGTTTGAGCAAGCTATAAAGAGGAAGCATGCTGTCCTGTGTCAGCAAAAACTCGAGCAGAAATTGGAAGCTCAACATAGATCCCTCCAGCGAACACTGAATGAGTTGAAAGAATATCAAAAGCAACATGACCACTACCTGAGACAGCAGGAGATCCTAGAAAAACATAAGCTGATTCAGGAAGAGCAAATCTTAAGAAATATCATCCATGAGACACAGATGGCAAAAGAGGCACAATTAGGAAATCATCAGATATGCCGTCTGGTCAACCAGCAGCATAGTTTACATTGCCAGTGGGACCAACCTGTGCGCTACCATCGTGGTGATATCTTTGAAAATGTGGACTATGTTCAGGACAAACAGCATATTCTGTGGCCTAAAAGAGCAGATTGTGYAGAAAGCTATCCTAGAGTCCCTGTCGGCGGGGAATTGCCAACGATCCACGAACTCAACAGTGATGATTATTCTTCAGAAGAAGAGGCCCAAACCCCTGACTGTTCCATAACTGACATCAGAAAAAGCCAGACTCTGTCCTACTTAGTCAAAGAATTAGAGGTCCGCATGGATCTGAAAGCCAAAATGCCAGATGACCATGCACGAAAAATTTTACTTTCCCGTATTAATAACTATACTATCCCAGAAGAAGAAATTGGGTCTTTCTTATTTCATGCTATTAACAAGAATGAGTACTGTATTCTTGTATTAACTGAAGTATTTGGGGTTTTTCAGCCAAATGCTCCTGTCTGGTTGATACTCAATGAAGCTGGACTCTACTGGAGAGCAGTAGGAAATAGCACRTTTGCTATTGCTTGTCTTCAGAGGGCTTTGAATTTGGCTCCCCTTCAATACCAGGATGTTCCTCTTGTGAACTTGGCCAACCTTTTGATTCACTATGGCCTTCATCTTGATGCCACTAAACTGCTGCTTCAAGCTTTGGCCATCAATAGCTCTGAGGTATTTTTATATCAGCATTACAGTTTCAAGGATGCTGGGAAGGAAAACATAATAGATTGA

Related Sequences

bmy_10491T0 Protein

Length: 607 aa      View alignments
>bmy_10491T0
MNLKHPHDLVILMRQETTVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVPLGDLDLYDGTYITLESKDISPEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQERVNLSAPLLPKEDPIFTYLSKRLGRSIDDIGHLIHEGLQKNSSSWVLYNMASFYWRIKNEPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSADAAVVVHAALDDSDFFTSYYTLGNIYAMLGEYNHSVLCYDHALQAKPGFEQAIKRKHAVLCQQKLEQKLEAQHRSLQRTLNELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHSLHCQWDQPVRYHRGDIFENVDYVQDKQHILWPKRADCXESYPRVPVGGELPTIHELNSDDYSSEEEAQTPDCSITDIRKSQTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPEEEIGSFLFHAINKNEYCILVLTEVFGVFQPNAPVWLILNEAGLYWRAVGNSTFAIACLQRALNLAPLQYQDVPLVNLANLLIHYGLHLDATKLLLQALAINSSEVFLYQHYSFKDAGKENIID*