Sequence detailsbmy_10504 (Coding sequence)

Part of scaffold_544 (SequenceType object (1))

For more information consult the page for scaffold_544 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LAMC1ENSTTRG00000007683 (Bottlenosed dolphin)

Gene Details

laminin, gamma 1 (formerly LAMB2)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007269, Bottlenosed dolphin)

Protein Percentage 97.62%
cDNA percentage 96.83%
Ka/Ks Ratio 0.17292 (Ka = 0.0147, Ks = 0.0853)

LAMC1ENSBTAG00000011966 (Cow)

Gene Details

laminin subunit gamma-1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015881, Cow)

Protein Percentage 94.06%
cDNA percentage 92.04%
Ka/Ks Ratio 0.1171 (Ka = 0.0315, Ks = 0.2689)

Additional orthologs identified in other species via the OPTIC pipeline.

LAMC1 (Human)   Lamc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2781 bp    Location:521758..554640   Strand:+
Raw sequence 
>bmy_10504
ATGAAAGCCAGTTCAGTGATCCTCTTCTCCACATCATACACAGGTGCTGGATATTTGGATGATGTCACCCTGGCAAGCGCTCGTCCTGGGCCTGGGGTCCCTGCAACTTGGGTGGAGTCCTGCACCTGTCCTGTGGGATACGGAGGGCAGTTTTGTGAGATGTGCCTCTCAGGTTACAGAAGAGAAACTCCGAGTCTTGGACCATACAGTCCATGTGTGCTTTGTACCTGCAATGGGCACAGTGAGACCTGTGACCCTGAGACAGGTGTTTGTAACTGCAGAGAGAATACAGCCGGGCCCCACTGTGAGAAGTGTAGTGACGGGTACTATGGAGATTCAACTGTGGGCACCTCCTCTGATTGCCAACCCTGTCCGTGTCCTGGGGGCTCCAGTTGTGCTGTTGTCCCTAAGACACAGGAGGTGGTGTGCACCAACTGTCCTACTGGCACCACTGGTAAAAGATGTGAGCTCTGTGATGACGGCTACTTTGGAGACCCYCTGGGTAGAAACGGCCCTGTGAGGCTTTGTCGCCTGTGCCAGTGCAATGACAACATCGATCCCAACGCAGTTGGAAATTGCAATCGCTTGACGGGAGAATGCCTGAAGTGCATCTATAACACGGCTGGCTTCTACTGTGACCGGTGCAAAGACGGATTTTTTGGAAATCCCCTGGCTCCCAATCCAGCAGACAAGTGCAAAGCCTGCGACTGCAACCCCTACGGGACCGTGAAGCAGCAGAGCAGCTGTAACCCTGTGACGGGGCAGTGTGAGTGTCTGCCTCATGTGACCGGCCGGGACTGTGGAGCTTGTGACCCTGGATTCTACAACCTGCAGAGCGGGCAGGGCTGTGAGAGGTGTGACTGCCATGCTTTGGGTTCCACCAATGGACAGTGTGACATCCACACTGGCCAGTGTGAGTGCCAGCCTGGCATCACCGGTCAGCAGTGCGAACGCTGCGAGGTCAACCACTTTGGGTTTGGACCTGAAGGCTGTAAACCCTGTGACTGTCATCCTGAGGGGACTCTTTCCCTCCAGTGCAAAGATGATGGTCTCTGTGAATGCAARGAAGGCTTTGTTGCTGATCATCGAGCAAAACTCCAGGAATTAGAGAATCTCGTTGCAAACCTTGGAACCGGGGACGAGATGGTGACGGATCAAGCCTTTGAGGATAGACTAAAGGAAGCAGAGAGAGAGGTGACTGACCTCCTTCGTGAGGCCCAGGATGTCAAAGATGTAGACCAAAATTTGATGGATCGCCTCCAGAGAGTGAATAACACCTTATTCAGCCAAATTAGCCGTTTACAGAATATCCGGAATACCATTGAAGAGACTGGAAACTTGGCTGAACAAGCATGTGCCCGGGTAGAAAGCACAGAGCAGTTGATTGAAATCGCATCCAGAGAACTTGAGAAAGCAAAAGTTGCCATTGCCAATGTGTCAATCACTCAGCCAGAATCTACAGGGGACCCAAACAACATGACTCTTTTGGCGGATGAGGCACGAAAGCTTGCTGAACGCCATAAACAAGAAGCTGATGACATTGTACGAGTGGCAAAGGCAGCCAATGATACATCAACTGAGGCATATAATCTGCTTTTGAGGACACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTAATAGAAAGTATGAACAAGCGAAGAACATCTCACAGGATCTAGAGAAGCAAGCTGCCCGAGTACATGAGGAGGCCAAGAAGGCTGGTGAGAAAGCTGTGGAGATCTATGCCAGTGTTGCCCAGCTGACTCCTGTGGACTCAGAAGCCATGGAGAATGAGGCAAATAAAATAAAGAAGGAGGCTGAGGATCTGGATCGTCTGATTGACCAGAAGTTAAAAGATTATGAGGACCTCAGACAGGACATGAGGGGGAAGGAATTTGAAGTAAAGAACCTTCTGGAAAAAGGAAAGACCGAACAGCAGACTGCCGACCAACTCCTAGCCCGAGCTGATGCTGCCAAGGCTCTTGCGGAAGAAGCTGCTAAGAAGGGACGAAATACCTTACAAGAAGCCAATGACATTCTCAGCAACCTGAAAGATTTTGATAGGCGAGTAAATGATAACAAGACGGCTGCAGAGGAGGCACTAAGGAGAATCCCTGCCATCAACCAGACTATAATTGAAGCCAATGAAAAGACCAGGGAAGCACAGCTGGCTCTGGGCAATGCTGCYGCAGATGCCACCGAGGCCAAGAACAAGGCCCACGAGGCGGAGAGGATCGCCAGCGCTGTCCAAAAGAATGCTACTAGCACCAAGGCAGAAGCTGAGAGGACTTTTGCAGAAGTTACAGATCTGGATAATGAGGTGAATAATATGTTGAAACAGCTACAGGAAGCAGAAAAGGAGCTGAAGAAAAAACAAGATGATGCTGACCAGGATATGATGATGGCAGGGATGGCTTCACAGGCTGCTCAGGAAGCTGAGATCAATGCCAGGAAGGCCAAAAGCTCTGTCACCAGCCTCCTCAACCTTATTAATGACCTCCTGGAGCAGCTGGGGCAGCTGGACACAGTGGACCTGAACAAGCTAAATGAGATTGAAGGTACCCTGAACAAAGCCAAAGACGAAATGAAAGTCAGTGATCTAGACAGGAAAGTGTCTAACCTGGAGAACGAAGCCAGGAGGCAGGAGGCTGCCATCATGGACTACAACAGAGACATTGAGGAGATCCTGAAGGACATTCGCAACCTGGAAGACATCAGGAAGACCTTACCTTCCGGCTGCTTCAACACCCCGTCCATTGAGAAGCCCTAG

Related Sequences

bmy_10504T0 SequenceType object (3)

Length: 927 aa      View alignments
>bmy_10504T0
MKASSVILFSTSYTGAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCNCRENTAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACDCNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIHTGQCECQPGITGQQCERCEVNHFGFGPEGCKPCDCHPEGTLSLQCKDDGLCECKEGFVADHRAKLQELENLVANLGTGDEMVTDQAFEDRLKEAEREVTDLLREAQDVKDVDQNLMDRLQRVNNTLFSQISRLQNIRNTIEETGNLAEQACARVESTEQLIEIASRELEKAKVAIANVSITQPESTGDPNNMTLLADEARKLAERHKQEADDIVRVAKAANDTSTEAYNLLLRTLAGENQTAFEIEELNRKYEQAKNISQDLEKQAARVHEEAKKAGEKAVEIYASVAQLTPVDSEAMENEANKIKKEAEDLDRLIDQKLKDYEDLRQDMRGKEFEVKNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILSNLKDFDRRVNDNKTAAEEALRRIPAINQTIIEANEKTREAQLALGNAAADATEAKNKAHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNNMLKQLQEAEKELKKKQDDADQDMMMAGMASQAAQEAEINARKAKSSVTSLLNLINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSNLENEARRQEAAIMDYNRDIEEILKDIRNLEDIRKTLPSGCFNTPSIEKP*