Sequence detailsbmy_10510 (Coding sequence)

Part of scaffold_544 (SequenceType object (1))

For more information consult the page for scaffold_544 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMG7ENSTTRG00000014778 (Bottlenosed dolphin)

Gene Details

SMG7 nonsense mediated mRNA decay factor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014015, Bottlenosed dolphin)

Protein Percentage 98.55%
cDNA percentage 98.75%
Ka/Ks Ratio 0.27693 (Ka = 0.0069, Ks = 0.0248)

SMG7ENSBTAG00000008003 (Cow)

Gene Details

protein SMG7

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000033867, Cow)

Protein Percentage 92.76%
cDNA percentage 92.9%
Ka/Ks Ratio 0.30173 (Ka = 0.0479, Ks = 0.1586)

Additional orthologs identified in other species via the OPTIC pipeline.

SMG7 (Human)   Smg7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3762 bp    Location:885702..938576   Strand:+
Raw sequence 
>bmy_10510
ATGAGAAATTGGATGTTCTTGCAGATAGTCATTGTGGGAGAAAACGTTTCATTTAAGTCCCAGATGAGGACCGGAAACTTGAAATCAGAGGAGCATCTGAAATCAAGTAATATTAGGCAGGCAGAAGTCCTGAAGGCTGACATGACAGATTCTAAGCTGGGTCCAGCCGAGGTCTGGACATCCAGGCAGGCTCTGCAGGACCTGTACCAGAAGATGCTGGTTACTGATTTGGAATACGCTTTAGACAAGAAAGTAGAACAAGATCTCTGGAATCATGCCTTTAAGAATCAGATCACAACACTACAAGGCCAGGCAAAGAATCGAGCAAACCCGAATCGGAGTGAAGTTCAGGCAAACCTTTCTCTGTTCCTAGAGGCAGCTAGTGGCTTCTATACTCAGTTATTACAAGAACTGTGTACAGTGTTTAATGTAGATTTACCATGCCGTGTGAAGTCTTCCCAATTGGGAATTATCAGCAATAAACAGACGCATACCAGCGCCATAGTGAAGCCACAGTCTAGCTCCTGTTCCTATATCTGCCAGCACTGCCTCGTCCACCTTGGAGACATTGCTCGATACAGAAACCAGACCAGCCAGGCAGAGTCCTACTATAGGCATGCGGCTCAGCTTGTCCCCTCTAATGGTCAGCCTTACAATCAGTTGGCTATCTTAGCTTCTTCCAAAGGAGACCATCTGACCACAATTTTCTACTACTGCAGAAGCATTGCTGTGAAGTTCCCTTTCCCAGCTGCCTCTACTAATCTACAAAAAGCACTTTCTAAAGCACTGGAAAGCCGGGATGAGGTGAAAACCAAATGGGGTGTTTCTGACTTCATCAAGGCCTTTATTAAGTTCCACGGTCATGTGTACCTGAGTAAGAGCTTGGAAAAGTTGAGCCCTCTTCGAGAGAAATTGGAAGAACAGTTTAAGAGGCTGCTATTCCAAAAAGCTTTCAACTCTCAGCAGTTAGTTCACGTCACTGTCATTAACCTGTTTCAACTTCATCACCTTCGTGACTTTAGCAATGAAACGGAACAGCATAGTTATAGCCAAGATGAGCAGCTGTGTTGGACACAGTTGCTGGCCCTCTTTATGTCTTTTCTTGGCATCCTGTGCAAGTGTCCTCTCCAGAACAAGTCTCAGGAGGAATCCTACAATGCCTATCCCCTACCTGCAGTCAAGGTCTCCATGGACTGGCTGAGACTCAGACCCAGGGTCTTTCAGGAGGCAGTGGTGGATGAAAGACACRTTTGGCCTTGGCTAATTTCTCTTCTGAATAGTTTCCATCCCCATGAAGAGGATCTTTCAAGTACTAATGCTACACCACTTCCAGAGGAGTTTGAGTTACAAGGATTCTTGGCTTTGAGACCTTCTTTCAGGAACTTGGATTTTTCCAAAGGCCACCAGGGTATTACAGGAGACAAAGAGGGTCAGCAAAGACAAATACGACAGCAGCGCTTGATCTCTATAGGCAAATGGATCGCAGATAATCAGCCAAGGCTGATTCAGTGTGAAAATGAGGTAGGGAAATTGTTGTTTATCACAGAAATCCCAGAGTTAATACTGGAAGACCCCAGTGAAGCCAAAGAGAACCTCATTCTGCAAGAAACAACCATCATAGAGTCACTGGCTGTGGATGGGAACCCAGGACTGAAATCAGTGCTGTCTACAGGCCGAAATCTAAGCAACAACTGTGACACAGGAGAGAAACCAGTGGTCACCTTCAAAGAGAACATTAAGCCACGAGAAGTGAACAGAGACCAAGGAAGAAGTTTTCCTCCCAAAGAGGTGAGAAGGGACTATAGCAAAGGAATAACTGTAACTAAGAATGATGGAAAGAAGGACAACAACAAGAGGAAAACAGAAACCAAGAAATGCACCTTAGAAAAGTTACAGGAAACAGGAAAGCAGAATGTGGCAGTGCAGGTAAAATCCCAGACAGAATTAAGAAAGACTCCAGTGTCTGAAGCCAGGAAAACACCTGTAACTCAAGCCCCAAGTCAAGCAAGTAACTCCCAGTTCATCCCCATTCATCACCCTGGAGCCTTCCCTCCTCTTCCCAGCCGGCCAGGGTTCCCGCCCCCAACCTATGTTATCCCCCCTCCTGTGGCGTTTTCTATGGGCTCAGGTTACACCTTCCCAGCTGGTGTTTCTGTCCCGGGAACCTTTCTTCAGCCTACAGCTCACTCTCCAGCAGGAAACCAGGTGCAAGCTGGGAAACAGTCCCACATTCCTTATAGCCAGCAACGGCCCTCTGGACCAGGGCCAATGAACCAGGGACCTCAACAACCACAGCCACCCTCCCAGCAACCCCTTACATCTTTACCAGCTCAGCCAACAGCACAGTCTACAAGCCAGTTGCAGGTTCAGGCTCTAGCTCAGCAGCAACAATCCCCTACAAAAGCTGTGCCGGCTTTGGGGAAAAGCCCTCCTCACCACTCTGGATTCCAGCAGTATCAACAGGCGGATGCCTCCAAACAGCTGTGGAATCCCCCTCAGGTTCAAGGCCCATTAGGGAAAATCATGCCTGTGAAACAGCCCTACTACCTTCAAACCCAAGACCCCATAAAACTGTTTGAGCCGTCATTGCAACCTCCTGTAATGCAGCAGCAGCCTCTAGAGAAAAAAATGAAGCCTTTTCCCATGGAGCCATATAACCATAATCCCTCAGAAGTCAAGATCCCAGAATTCTACTGGGATTCTTCCTACAGCATGGCTGATAACAGAGCTGTAATGGCACAGCAAGCCAACATGGACCGCAGGGGCAAACGGTCACCGGGAGTCTTCCGTCCAGAGCAGGATCCTGTGCCCAGGATGCCATTTGAGGACCCCAAGGGCTCCCCTCTGCTTCCTCCGGACCTGTTAAAGAGTCTGGCTGCCTTGGAGGAAGAGGAAGAGCTGATTTTTTCTAACCCTCCTGATCTTTACCCAGCTCTGCTGGGGCCTCTCGCCTCTCTTCCTGGACGAAGCCTCTTTAAATCCTTATTGGAGAAGCCCTCAGAGCTCATGTCACATTCATCCTCTTTCCTGTCGCTCACCGGATTCTCTCTCAATCAGGAAAGATACCCAAATAACAGCGTGTTCAATGAGGTATATGGGAAAAACCTGACAAGCAGCTCTAAAGCAGAACTTAATCCCTCATTGGCCCCCCAGGAAACATCATTGTACTCCCTTTTTGAAGGGACTCCGTGGTCTCCATCACTTCCTGCCAGTTCAGATCATTCAACACCAGCCAGCCAATCTCCTCATTCCTCCAACCCAAGCAGCCTGCCAAGCTCCCCTCCGACACACAACCACAATTCTGTCCCATTCTCCAATTTTGGACCCATTGGGACTCCAGATAACAGGGATAGGAGAACTGCAGATCGGTGGAAAACTGATAAGCCAGCCATGGGTGGGTTTGGCATTGATTATCTCTCAGCAACGTCATCCTCTGAGAGCAGTTGGCATCAGGCCAGCACTTCAAGTGGCTCCTGGACAGGCCATGGCCCATCCATGGAGGATTCTTCTGCTGTCCTCATGGAAAGCCTAAAGAAGCAACAGCGTGGGGTCCAGCAGCTGGGGCCCAAAAGACAGTCTGAAGAAGAAGGAAGCAGCAGCAGCGGCGTCTGCATAGCCCACCGAGGGGCCAGGCCCCTGCCCGGCTGCAGTCTCCCAGCCTCCACGTTCAGAGTGAAATTCAAGGCAACACAGACACGTGTGCATCATGCAGAGAAGAAAACACAAGGAAGTCCATTCTGGAAAAGGCGGAAGAAAGGAAAA

Related Sequences

bmy_10510T0 SequenceType object (3)

Length: 1254 aa      View alignments
>bmy_10510T0
MRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERHXWPWLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETTIIESLAVDGNPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARKTPVTQAPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKIPEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSVFNEVYGKNLTSSSKAELNPSLAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTSSGSWTGHGPSMEDSSAVLMESLKKQQRGVQQLGPKRQSEEEGSSSSGVCIAHRGARPLPGCSLPASTFRVKFKATQTRVHHAEKKTQGSPFWKRRKKGK