Part of scaffold_544 (Scaffold)

For more information consult the page for scaffold_544 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APOBEC4 ENSTTRG00000014784 (Bottlenosed dolphin)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014018, Bottlenosed dolphin)

Protein Percentage 96.73%
cDNA percentage 98.09%
Ka/Ks Ratio 0.59007 (Ka = 0.0142, Ks = 0.0241)

APOBEC4 ENSBTAG00000047395 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053895, Cow)

Protein Percentage 87.74%
cDNA percentage 90.74%
Ka/Ks Ratio 0.30725 (Ka = 0.0615, Ks = 0.2001)

APOBEC4  (Minke Whale)

Gene Details

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)

External Links

Gene match (Identifier: BACU020247, Minke Whale)

Protein Percentage 98.37%
cDNA percentage 98.91%
Ka/Ks Ratio 0.46176 (Ka = 0.0064, Ks = 0.0138)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location:1017004..1015901   Strand:-
>bmy_10513
ATGGAGCCCTTATATGAGGAATACCTAGCCAATCGTGGAACAATAGTAAAACCTTATTACTGGCTGAGATTCTCTCTCGATTGCTCTAATTGTCCTTACCATATTCGGACAGGTGAAGAAGCAAGAGTTCCCTACACAGAATTTTATCAGATTTTTGGMTTCCCTTATGGACCAACATATCCTCAAACAAAACACCTCACATTCTATGAACTAAAAACTTCTTCTGGAAGCCTGGTGCAAAAGGGCCATGCTAGCAGTTGCACTGGGAATGATACCCATCCGGAATCAATGTTATTCGAGATGAATGGTTACTTTGACTCCGCCATACACAATAACGACGGCATCAGGCATATCATTCTGTATTCCAGCAACTCCCCTTGCAATGAATCTAACCACTGCTGCATCAGCAAAATGTACAATTTCCTGGTAATGTATCCAGACGTCACTCTTAGTATTTACTTTTCTCAGCTCTATCATACTGAGGCTGAATTTCCTGCCTCCGCGTGGAACCGCGAAGCTCTCCGGAGCCTGGCCAGTTTATGGCCGCAGGTCACTTTGAGCCCAATAAGTGGTGGGATTTGGCATTCTCTCCTCAACAACTTTGTGAGTGGTATGTCGGGAGTGACTGTTTTCCAGCCCATTTTAACCGGGAGAGCACTGGCAGACAGGCACAATGCATATGAAATCAATGCCATAACAGGGGTGAAACCCTATTTCACCAATATTCTTCCCCAGGCAAAAGAGAATCAGAACATAAAAGCTCAGGCAGCTTTAGAGGGCTACCACTTAAACAAYGTCTTTCCCAGACAGTCTTTTCAAGTGACAAGTGGACAACTGCAACCCAATCTGACCCTAGACCCCAGGGTTCCTGTCATTTTCGTACTGGTGCCTTTCAGAAACCTACCACCAATCCATGTAGGACAAAACCCACATAAACCCAGGAATATCGTAAAGCACTTAAATATGCCTCAAATATCATTCCAGGAAACCAATGATYTCAGAAGGCCTCCCATTGGAATGCCAGTGGAGAGAGTAGAAATCACCGAACAGTTTGCTAGTAGCAAAGAGGCAGATGAAAAGAAGAAGAAGAAAGGGAAAAATTAA

Related Sequences

bmy_10513T0 Protein

Length: 368 aa      View alignments
>bmy_10513T0
MEPLYEEYLANRGTIVKPYYWLRFSLDCSNCPYHIRTGEEARVPYTEFYQIFGFPYGPTYPQTKHLTFYELKTSSGSLVQKGHASSCTGNDTHPESMLFEMNGYFDSAIHNNDGIRHIILYSSNSPCNESNHCCISKMYNFLVMYPDVTLSIYFSQLYHTEAEFPASAWNREALRSLASLWPQVTLSPISGGIWHSLLNNFVSGMSGVTVFQPILTGRALADRHNAYEINAITGVKPYFTNILPQAKENQNIKAQAALEGYHLNNVFPRQSFQVTSGQLQPNLTLDPRVPVIFVLVPFRNLPPIHVGQNPHKPRNIVKHLNMPQISFQETNDXRRPPIGMPVERVEITEQFASSKEADEKKKKKGKN*