Part of scaffold_548 (Scaffold)

For more information consult the page for scaffold_548 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PARP1 ENSTTRG00000000188 (Bottlenosed dolphin)

Gene Details

poly (ADP-ribose) polymerase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000174, Bottlenosed dolphin)

Protein Percentage 84.54%
cDNA percentage 85.35%
Ka/Ks Ratio 0.27171 (Ka = 0.054, Ks = 0.1989)

PARP1 ENSBTAG00000000837 (Cow)

Gene Details

poly

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001113, Cow)

Protein Percentage 80.52%
cDNA percentage 84.49%
Ka/Ks Ratio 0.25563 (Ka = 0.1209, Ks = 0.4731)

PARP1  (Minke Whale)

Gene Details

poly (ADP-ribose) polymerase 1

External Links

Gene match (Identifier: BACU001657, Minke Whale)

Protein Percentage 84.48%
cDNA percentage 86.49%
Ka/Ks Ratio 0.36166 (Ka = 0.1176, Ks = 0.3252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2067 bp    Location:60363..102155   Strand:+
>bmy_10515
GGGCGTGCCCGCCGCCAGGCATCAGCAATCTATCCGGAGCGACGGGTGGCCTACGCGGCGTGCTCGGAGGCGGCGGCGGCTGCGTCTCTAGACGCTCGGGCGCCAGCGGGGAGCGGACCGGCGGGCGAGGCGGCGATAGCAGCAGCGGGTCTCCAGGTAGCGGCGTCGGGCTCCCGGAGCTGCAGCAGCTCGAGGAGAAGGATGGCGGAGTCATCGGACAAGCTCTACCGGGTCGAGTACGCCAAGAGCGGGCGCGCCTCTTGCAAGAAATGCAGCGAGAGCATCCCCAAGGACTCGCTCCGGATGGCCATCATGGTGCAGTCGCCCATGTTCGACGGGAAGGTCCCGCACTGGTACCACTTCTCCTGCTTCTGGAAGGTCGGCCACTCCATACGGCACCCTGACGTCGAGGTGGATGGGTTCTCCGAGCTCCGCTGGGACGACCAGCAGAAGGTCAAGAAGACGGCCGAGGCTGGAGGAGTGACGGGCAAAGGCCAAGGTGGAGTTGGCAGCAAGACGGAGAAGACACTGGGCGACTTTGCGGCAGAGTACGCCAAGTCCAACAGAAGCACGTGCAAGGGCTGCATGGAGAAGATCGAAAAGGGCCAGGTGCGCCTGTCCAAGAAGATGCTGGACCCCGAGAAGCCCCAGCTAGGCATGATCGACCGCTGGTACCACCCGAACTGCTTTGTTCAGAACAGGGAGGAGCTGGGCTTCCGGCCTGAATACAGCGCGAGCCAGCTCAAGGGCTTCAGCCTCCTCACCGCAGAGGACAAAGAAGCCCTGAAGAAGCAGCTCCCGGGCATCAAGAGTGAAGGAAAGAGAAAAGGCGACGAGGTGGATGGAATGGAGGAAGTGGCCAAGAAGAAATCTAGAAAAGAAAAAGACAAGGAGAGTAAGCTTGAAAAGGCCCTCAAGGCCCAGAACAACCTGATCTGGAACATCAAGGACGAGCTAAAGAAAGCGTGTTCGACGAATGACCTGAAAGAGCTGCTCATCTTCAACAAGCAGCAAGTGCCCTCCGGGGAGTCGGCGATCTTGGACCTAGTGGCCGACGGCATGGTGTTCGGTGCCCTCCTTCCCTGCGAGGAATGCTCAGGCCAGCTGGTCTTCAAGAGCGATGCCTATTACTGTACCGGGGATGTCACTGCCTGGACCAAGTGTATGGTCAAGACACAGACGCCCAACCGGAAGGAGTGGGTGACCCCAAAGGAATTCCGAGAAATCTCTTGCCTCAAGAAACTGAAGATCAGAAAGCAGGACCGTATATTCCCCCCAGAGACCAGCGCCCCGCTGGCGGCAGCACCCCTGCCCTCTGCAGCCTCAGCGCCCGCCACTGTGAACTCCGCTCCCCCAGACAAGCCGTTATCCAACATGAAGATCCTGACTCTTGGGAAACTGTCCCAGAACAAGGATGAAGTGAAGGCCACAATCGAGAAACTCGGGGGGAAGTTGACAGGGACCGCCAACAAGGCCTCCCTGTGCATCAGTACCAAAAAGGAGGTCGACAAGATGAATAAAAAGATGGAGGAAGTAAAAGAAGCTAACGTCCGCGTCGTGTCTGAGGATTTCCTCCAGGACATCTCCGCCTCGACCAAGAGCCTTCAGGAGTTGCTCTCAACCCACCTCTTGTCCCCCTGGGGGGCCGAGGTGAAGGCGGAGCCTGTTGAAGCCGTGGCCCCAAAAGGGAAGTCGGGGGCTGTGCTCTCCAAGAAGAGCAAGGGCCCCGTCAAGGAGGAAGGTACCAACAAATCTGAAAAGAGAATGAAATTAACTCTTAAAGGAGGAGCAGCTGTCGACCCTGATTCTGGTAAGGAAGCGGGAGTGAGCTGTGGGCGCCCCGCTGGTGGGGGAAACCGTGTGGGGCGGGCCGCGCCTCGCCCTCCGGCCTCAAGGCTCCCCGGTCCTGAGAGCGCACACGTCTTGGGGGGAACCTGCAGACCCCCTTCTCCCTGTGGGAATCGTCACAGGAGCTTTGCCCGTGACAGGTCTGGAACACAGCGCACACGTCCTGGAGAAAGGCGGGAAGGTGTTCAGCGCCACCCTCGGCCTGGTGGACATCGTTAA

Related Sequences

bmy_10515T0 Protein

Length: 689 aa      View alignments
>bmy_10515T0
GRARRQASAIYPERRVAYAACSEAAAAASLDARAPAGSGPAGEAAIAAAGLQVAASGSRSCSSSRRRMAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPHWYHFSCFWKVGHSIRHPDVEVDGFSELRWDDQQKVKKTAEAGGVTGKGQGGVGSKTEKTLGDFAAEYAKSNRSTCKGCMEKIEKGQVRLSKKMLDPEKPQLGMIDRWYHPNCFVQNREELGFRPEYSASQLKGFSLLTAEDKEALKKQLPGIKSEGKRKGDEVDGMEEVAKKKSRKEKDKESKLEKALKAQNNLIWNIKDELKKACSTNDLKELLIFNKQQVPSGESAILDLVADGMVFGALLPCEECSGQLVFKSDAYYCTGDVTAWTKCMVKTQTPNRKEWVTPKEFREISCLKKLKIRKQDRIFPPETSAPLAAAPLPSAASAPATVNSAPPDKPLSNMKILTLGKLSQNKDEVKATIEKLGGKLTGTANKASLCISTKKEVDKMNKKMEEVKEANVRVVSEDFLQDISASTKSLQELLSTHLLSPWGAEVKAEPVEAVAPKGKSGAVLSKKSKGPVKEEGTNKSEKRMKLTLKGGAAVDPDSGKEAGVSCGRPAGGGNRVGRAAPRPPASRLPGPESAHVLGGTCRPPSPCGNRHRSFARDRSGTQRTRPGERREGVQRHPRPGGHR*