Part of scaffold_548 (Scaffold)

For more information consult the page for scaffold_548 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDE2 ENSTTRG00000012379 (Bottlenosed dolphin)

Gene Details

SDE2 telomere maintenance homolog (S. pombe)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011742, Bottlenosed dolphin)

Protein Percentage 87.08%
cDNA percentage 89.15%
Ka/Ks Ratio 0.58868 (Ka = 0.0494, Ks = 0.0839)

C16H1ORF55 ENSBTAG00000012787 (Cow)

Gene Details

UPF0667 protein C1orf55 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016992, Cow)

Protein Percentage 76.6%
cDNA percentage 83.37%
Ka/Ks Ratio 0.52539 (Ka = 0.1583, Ks = 0.3014)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1476 bp    Location:441223..454336   Strand:+
>bmy_10522
AGCAGGCTCGGCCGTCCAAAGTCACGTGACTATCCCCAGGGGAGGAACGGGACGAGCGGAAGATGTGAGGGGCGGGGCGCTGGAGGGCGAGCTCAACGTCATCAAGATACGCCGAGCTGGTTGTGGCGCTTAGCGCTTCTGGGAGTCTTGAGATCCGGCGACTGGGTGAAATGGCGGAGGCCGCGGCCCTGGTGTGGCTTCGGAGCCCCAGCTTCGGATGCAAGGCGGTGTGGTGTGCCTCCGCCCCGCGCTCCGTACGCGATTTTATCCACCTACACTGCCAAGATCAGTGATACAGTGCAGCATGGAGCTGTTTATAGTTTGGAACCCAGACTTCGTGGTGGAAAAGGAGGTTTTGGCTCTATGCTCCGAGCACTTGGTGCTCAGATTGAGAAGACAACCAATCGAGAAGCTTGCCGGGATCTCAGTGGAAGGAGACTGCGAGATGTCAATCACGAAAAAGCAATGGCTGAATGGGTAAAACAACAAGCCGAGCGAGAAGCTGAAAAGGAGCAAAAGCGCCTGGAACGATTGCAGCGGAAGCTTGCAGAACCCAGGCACTGCTTCACCAGCCCCGACTACCAGCAGCAGTGCCATGAGATGGCCGAGCGTCTGGAGGATTCCGTCCTCCGAGGTATGCAGGCTGCCTCCAGCAAGACGGTATCGGCAGGAATCCGTGAGAGTCGGAAACGGCCTAACAAATCAAAAACAGACAGAGCAGCCAGTGCAGAGAAAAAGAAATGCTTTTGGTTGGGCATGGAAGGACTAGAGACTGCAGAAGGGTCTGGCTCTGAGAGCTCCGATAATGACAGTGCAGAAGCACCTAGTACTTCAGGAATGAGCTTTCACGTTCCCCAAAATGGCAGTGATGGTGTTGAGATGGCAGCCGAATTTCCTAGTAGCTCTCAGCGGACAAGAGTATTGAGTGCAGACTCTAGATCACGAGAAAAACTACAGACCCCTGTGACGGATTCTGGGAATGGTATTTCAGAAGACTTGTATGCTGAGCTGGGAGAGGCATCTACCCAGGAGTACATGGAAGGGAAGATGGCTATAGAAACAGAGAAAACCCAGGAGAAAAATGAGGCAGAGAGTAAAGAACCCTTAGAAAAGGAAGCAGCTGGAGTTGGACTGAATAAGGAGCAGGAGACCAAAGAAATGACTGATGGGGAAAGAGCTGCCAAGGGAGCACCTGGAGAAGATAGGGAAAACATACCTGTTGCCAAGCTGGAGGAAAGCCAGTCAGGAAACACAGATATCGGTCAGGAAACTGTAGATTTACTGGCATTCAGCTCTGTTGCAGAAGTGGAGTTGCTGGGTTTGGAGAAGCTCAAGTGTGAACTCACGGCCCGGGGACTGAAGTGCGGGGGCACCCTCCAGGAGCGGGCGGCGAGGCTCTTCTCTATCAGAGGACTGGCAAAGGAGCGGATAGATCCAGCTTTATTTGCCAAGCCTTCGAAAGGGAAGAAGAAGTGA

Related Sequences

bmy_10522T0 Protein

Length: 492 aa      View alignments
>bmy_10522T0
SRLGRPKSRDYPQGRNGTSGRCEGRGAGGRAQRHQDTPSWLWRLALLGVLRSGDWVKWRRPRPWCGFGAPASDARRCGVPPPRAPYAILSTYTAKISDTVQHGAVYSLEPRLRGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLAEPRHCFTSPDYQQQCHEMAERLEDSVLRGMQAASSKTVSAGIRESRKRPNKSKTDRAASAEKKKCFWLGMEGLETAEGSGSESSDNDSAEAPSTSGMSFHVPQNGSDGVEMAAEFPSSSQRTRVLSADSRSREKLQTPVTDSGNGISEDLYAELGEASTQEYMEGKMAIETEKTQEKNEAESKEPLEKEAAGVGLNKEQETKEMTDGERAAKGAPGEDRENIPVAKLEESQSGNTDIGQETVDLLAFSSVAEVELLGLEKLKCELTARGLKCGGTLQERAARLFSIRGLAKERIDPALFAKPSKGKKK*