Sequence detailsbmy_10533 (Coding sequence)

Part of scaffold_542 (SequenceType object (1))

For more information consult the page for scaffold_542 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNIP1ENSTTRG00000005761 (Bottlenosed dolphin)

Gene Details

TNFAIP3 interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005449, Bottlenosed dolphin)

Protein Percentage 87.73%
cDNA percentage 88.87%
Ka/Ks Ratio 0.41065 (Ka = 0.0271, Ks = 0.066)

TNIP1ENSBTAG00000012671 (Cow)

Gene Details

TNFAIP3-interacting protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016836, Cow)

Protein Percentage 89.6%
cDNA percentage 90.49%
Ka/Ks Ratio 0.2124 (Ka = 0.0594, Ks = 0.2798)

TNIP1 (Minke Whale)

Gene Details

TNFAIP3 interacting protein 1

External Links

Gene match (Identifier: BACU013100, Minke Whale)

Protein Percentage 93.25%
cDNA percentage 93.75%
Ka/Ks Ratio 0.34226 (Ka = 0.0489, Ks = 0.1428)

Additional orthologs identified in other species via the OPTIC pipeline.

TNIP1 (Human)   Tnip1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1665 bp    Location:141979..111424   Strand:-
Raw sequence 
>bmy_10533
ATGGAAGGGAGAGGACCATACCGGATCTACGACCCTGGGGGCGGCGTACCTCTGGGCGAGGCGTCCGCAGCTTTTGAGCGCCTAGTGGAGGAGAATTCCAGACTGAAGGAAAAAATGCAAGGGATAAAGATGTTAGGGGAGCTTTTGGAAGAGTCCCAGATGGAAGCGTCCAGGCTGCGGCAGAAGGCAGAGGAGCTGGTCAAGGACAGTGAGCTGCTCCCACCGCCGTCTCCCTCTTTGACCTCCTTCGACCACCTGGCTGAGCTCACAGGAAAGGATGCAGATGTCCCAGCAACCCCCGCTGACCCTGCACACCCCAGCGACAAGCCAGAGCCAAGCACCTCCTCTGAATTTGAGGTGGTCCCTGCCGAGGGGCATTCTTCACCAGAGAGCGGCGGCCACACCAGAAATACCATGGAGCTGGGTCCCCTGCCCCACGAGGACAGCAACCTGATGCTGCACCTGCAGCGCCTGGAGACCACCCTGAGCGTGTGCGCCGAGGAGCCTGACCACAGCCAGCTCTTCACGCACCTGGGCCGCATGGCCCTCGAGTTCAACCGGCTGGCTTCCAAGGTGCACAAGAATGAGCAGCGCACCTCCATCCTGCAGACCCTGTGTGAGCAGCTTCGGAAGGAGAATGAGGCCCTGAAGGCCAAGCTGGACAAGGGCCTGGAACAGCGGGATCAGGCTGCTGAGAGGCTCCGGCCAGATGCCCTTATTGCCCTGCCGGGGAAGAAGGCTGGTGTGACAGCAGGTAAAGTCCCAGAGGTGGGAGCCTTGGGTGCGGCTGAGAAGAAGGTGAGGATGCTGGAGCAGCAGCGCACGGAGCTGCTGGAAGTGAACAAGCAATGGGACCAGCATTTCCGGTCCATGAAGCAGCAGTATGAGCAGAAGACCGACAAGGAGCAGCTGACAGCAGAGGCCAAGGAGCTGCGCCAGAAGGTCAAATACCTGCAGGATCAGCTGAGCCCGCTCACCCGGCAGCGGGAGTACCAGGAGAAGGAGATTCAGCGGCTCAACAAGGCCCTGGAGGAAGCACTGAGTATCCAGGCCTCCCCATCATCTCCAGCAACAGCATTTGGGAGCCCGGAAGGAGCTGGAGGCCTGCTAAGGAAACAGGAGCTGGTCACTCAGAATGAATTGCTGAAACAGCAGGTGAAGATTTTTGAGGAGGACTTCCAGAGGGAGCGCAGCGACCGGGAGCGCATGAATGAGGAGAAGGAAGAGCTGAAGAAGCAGGTGGAGAAACTGCAAGCCCAGGTCACCCTGTCACATGCCCAGCTAAAAGCCTTCAAAGATGAGGAAAGGGCGAAAGATGCCCTGAGACAGCAGAAGAGGAAAGCAAAGACCTCGGCAGACCGCTACCACGTGGAGCCCCACCCGGAGCATCTCTTCGGGGCCTACCCCTACGCCTACCCGCCCATGCCCCCCGTTGTGCCGCACCGTGGCTTTGAGGACTGGTCCCAGGTCCGCTACCCGCCTCCCCCCACGGCCATGGAGCACCCACCCCCGCTTCCCAACTCGCGCCTCTTCCACCTGCCAGAATACACCTGGCGGCTGCCCTGTGGAGGGATACGCAGTCAGAGCTCCCAAGTGATGGGCTCACCCACGGCCAGGCCTACGGAACCAGAGTCCACCAAAAATGACCGTGAGGGACCTCAGTGA

Related Sequences

bmy_10533T0 SequenceType object (3)

Length: 555 aa      View alignments
>bmy_10533T0
MEGRGPYRIYDPGGGVPLGEASAAFERLVEENSRLKEKMQGIKMLGELLEESQMEASRLRQKAEELVKDSELLPPPSPSLTSFDHLAELTGKDADVPATPADPAHPSDKPEPSTSSEFEVVPAEGHSSPESGGHTRNTMELGPLPHEDSNLMLHLQRLETTLSVCAEEPDHSQLFTHLGRMALEFNRLASKVHKNEQRTSILQTLCEQLRKENEALKAKLDKGLEQRDQAAERLRPDALIALPGKKAGVTAGKVPEVGALGAAEKKVRMLEQQRTELLEVNKQWDQHFRSMKQQYEQKTDKEQLTAEAKELRQKVKYLQDQLSPLTRQREYQEKEIQRLNKALEEALSIQASPSSPATAFGSPEGAGGLLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQVEKLQAQVTLSHAQLKAFKDEERAKDALRQQKRKAKTSADRYHVEPHPEHLFGAYPYAYPPMPPVVPHRGFEDWSQVRYPPPPTAMEHPPPLPNSRLFHLPEYTWRLPCGGIRSQSSQVMGSPTARPTEPESTKNDREGPQ*