Sequence detailsbmy_10541 (Coding sequence)

Part of scaffold_542 (SequenceType object (1))

For more information consult the page for scaffold_542 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPARCENSTTRG00000013719 (Bottlenosed dolphin)

Gene Details

secreted protein, acidic, cysteine-rich (osteonectin)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013011, Bottlenosed dolphin)

Protein Percentage 86.67%
cDNA percentage 86.89%
Ka/Ks Ratio 0.12446 (Ka = 0.0118, Ks = 0.095)

SPARCENSBTAG00000014835 (Cow)

Gene Details

SPARC

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019758, Cow)

Protein Percentage 97.03%
cDNA percentage 94.5%
Ka/Ks Ratio 0.04208 (Ka = 0.0127, Ks = 0.3018)

SPARC (Minke Whale)

Gene Details

secreted protein, acidic, cysteine-rich (osteonectin)

External Links

Gene match (Identifier: BACU013091, Minke Whale)

Protein Percentage 99.01%
cDNA percentage 98.46%
Ka/Ks Ratio 0.05261 (Ka = 0.004, Ks = 0.0764)

Additional orthologs identified in other species via the OPTIC pipeline.

SPARC (Human)   Sparc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1056 bp    Location:723898..701385   Strand:-
Raw sequence 
>bmy_10541
GAGGGGGAGACCCAGCCCAGAGCTCTGAGTGGTTTCCTGTTACCAGGCTCTAAACCCCTCACATTCCTGCAGACCTTCAGACCGCCCAGAGCTCTCGCCTGCTGCCTGCTGTCTGCCTGCCTGCCACTGAGGGTTCCTAGCACCATGAGGGCCTGGATCTTCTTCCTTCTTTGCCTGGCCGGGTGGGCCTTGGCAGCCCCTCAACAGGAAGCCCTGCCTGATGAGACGGAGGTGGTCGAGGAAACCGTGGCTGAGGTGTCCGAGGTACCTGTGGGAACCAACCCCGTCCAGGTGGAAGTAGGAGAATTTGATGAAGGTGCTGAGGAAGCCGAGGAGGAGGTGGTGGCTGAAAACCCCTGCCAGAACCACCACTGCAAACATGGCAAGGTGTGCGAGCTGGACGAGAACAACACCCCCATGTGCGTGTGCCAGGACCCCACCACCTGCCCTGCCCCCAATGGCGAGTTTGAGAAGGTGTGCAGCAATGACAACAAGACCTTCGACTCTTCCTGCCACTTCTTTGCCACCAAGTGCACACTGGAGGGCACCAAGAAGGGCCACAAACTCCACCTGGACTACATCGGGCCTTGCAAATACATCGCTCCCTGCCTGGACTCCGAGCTGACTGAATTCCCCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGTCACGCTGTACGAGAGGGATGAGGACAACAACCTTCTGACCGAGAAGCAGAAGCTGCGAGTGAAGAAGATCCACGAGAATGAGAAGCGCCTGGAAGCCGGAGACCACCCTGTGGAGCTGCTGGCCCGGGACTTCGAGAAGAACTACAACATGTACATCTTCCCTGTGCACTGGCAGTTCGGGCAGCTGGACCAGCACCCCATCGATGGGTACCTGTCTCACACCGAGCTAGCCCCACTGCGTGCGCCCCTCATCCCCATGGAGCACTGCACCACCCGCTTTTTCGAGACCTGTGACCTGGACAACGACAAATACATCGCCCTGGACGAGTGGGCCGGCTGCTTCGGCATCAAGGAGCGGGACATCGACAAGGATCTCGTGATCTAA

Related Sequences

bmy_10541T0 SequenceType object (3)

Length: 352 aa      View alignments
>bmy_10541T0
EGETQPRALSGFLLPGSKPLTFLQTFRPPRALACCLLSACLPLRVPSTMRAWIFFLLCLAGWALAAPQQEALPDETEVVEETVAEVSEVPVGTNPVQVEVGEFDEGAEEAEEEVVAENPCQNHHCKHGKVCELDENNTPMCVCQDPTTCPAPNGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGHKLHLDYIGPCKYIAPCLDSELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKERDIDKDLVI*