Part of scaffold_547 (Scaffold)

For more information consult the page for scaffold_547 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CXCR4 ENSBTAG00000001060 (Cow)

Gene Details

C-X-C chemokine receptor type 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001406, Cow)

Protein Percentage 95.75%
cDNA percentage 93.58%
Ka/Ks Ratio 0.08038 (Ka = 0.0196, Ks = 0.2444)

CXCR4  (Minke Whale)

Gene Details

chemokine (C-X-C motif) receptor 4

External Links

Gene match (Identifier: BACU014942, Minke Whale)

Protein Percentage 98.9%
cDNA percentage 99.36%
Ka/Ks Ratio 0.65553 (Ka = 0.0057, Ks = 0.0087)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1110 bp    Location:235461..239203   Strand:+
>bmy_10547
ATGGACGGGTTCCATATGCCTGCCGAACTTGAAAGTGAATGTCCATTCCCTTGCCTTTTTCAGATATTCTCTTCAGATAATTACACAGAGGATGACTTGGGCTCAGGAGACTATGACTCCATGAAGGAACCCTGCTTCCGGGAGGAAAATGCCCATTTCAACCGTATCTTTCTGCCCACTGTCTACTCCATCATCTTCTTGACTGGCATAGTGGGTAACGGATTGGTCATCCTGGTCATGGGTTACCAGAAGAAACTGAGAAGCATGACAGACAAGTACAGACTGCACCTGTCTGTGGCAGACCTCCTCTTTGTCCTCACACTTCCCTTCTGGGCAGTTGATGCCGTGGCAAACTGGTACTTTGGGAAGTTCCTGTGCAAGGCAGTCCATGTCATCTACACAGTCAACCTCTACAGCAGTGTCCTCATCCTGGCCTTCATCAGTCTGGACCGGTACCTGGCTATCGTCCACGCCACCAACAGTCAGAGGCCAAGGAAACTGTTGGCTGAAAAGGTGGTCTATGTTGGTGTCTGGATACCTGCTCTCCTGTTGACTATTCCCGATTTCATCTTTGCCAACGTCAGGGAGGGGGATGGGAGGTACATCTGCGACCGCTTCTATCCCAGCGACTTGTGGTTGGTGGTGTTCCAGTTTCAGCACATCGTGGTTGGCCTTATCCTGCCGGGTATCGTCATCCTGTCCTGCTATTGCATTATCATCTCCAAGCTGTCCCACTCCAAGGGCTACCAGAAGCGAAAGGCCCTCAAGACCACAGTTATCCTCATCCTGGCTTTCTTTGCCTGCTGGCTGCCCTACTACATTGGGATCAGCATCGACTCCTTCATCCTCCTGGAAATCATCCAGCAAGGGTGTGAGTTTGAGAGCACTGTGCACAAGTGGATTTCCATCACCGAGGCCCTAGCCTTTTTCCATTGTTGCCTGAATCCCATCCTCTATGCCTTCCTTGGGGCCAAATTTAAAACCTCTGCCCAGCATGCACTCACCTCTGTGAGCAGAGGGTCCAGCCTGAAGATCCTCTCCAAGGGAAAGCGGGGTGGACATTCTTCTGTTTCAACCGAGTCGGAGTCTTCGAGTTTTCACTCCAGCTAA

Related Sequences

bmy_10547T0 Protein

Length: 370 aa      View alignments
>bmy_10547T0
MDGFHMPAELESECPFPCLFQIFSSDNYTEDDLGSGDYDSMKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGRYICDRFYPSDLWLVVFQFQHIVVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS*