Sequence details bmy_10550 (Coding sequence)

Part of scaffold_547 (Scaffold)

For more information consult the page for scaffold_547 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCT ENSTTRG00000003952 (Bottlenosed dolphin)

Gene Details

lactase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003721, Bottlenosed dolphin)

Protein Percentage 92.85%
cDNA percentage 94.14%
Ka/Ks Ratio 0.53492 (Ka = 0.0367, Ks = 0.0687)

LCT ENSBTAG00000015170 (Cow)

Gene Details

lactase-phlorizin hydrolase precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020185, Cow)

Protein Percentage 86.52%
cDNA percentage 88.75%
Ka/Ks Ratio 0.27228 (Ka = 0.0788, Ks = 0.2894)

Additional orthologs identified in other species via the OPTIC pipeline.

LCT (Human)   Lct (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4926 bp    Location:537130..574746   Strand:+
Raw sequence 
>bmy_10550
ATGATCCTATTTACTTATTTCCAGGATGCAGTTGACTTCCTCTCTCTTGATTTATCTTATGAATGCCAAAGTGAGGCAGATTTCCGGCAGAAGCTGAGTAAATTGCAGACTATTGAGCCAAAAGTGAAAGTTTTCATCTTCAATCTGAAACTCCAGGACTGCCTCTCCACCAAGAAGAACCCATCTGATCTGTTCTTCAGCCTTCTCACAGCCATAAGTGAAGAACAAGTGCTCACCATTGGGTTTGATCTTAGTACATTCCTGAGCTGTTCATCAAGTTCCAAGAAAAGCAGGTCTTGTTCTCTGACTGACAACCTGACCCTCCAGACTGCCCTGCAGCTGGACCCGGAGACAGCAGTAGACTCCTCGCTGCCCCACTCGGCCTATCAGAGAGTCTGGGAAATGTTTGCCAACCAGTCCAGGGCAGAAAGGGATGCTTTCCTGCAGGATGTTTTTCCTGAGGGTTTCCTCTGGGGCGTCTCCACAGGGGCTTTTAATGTGGAAGGAGGCTGGGCCGAGGACGGAAGAGGGGCGAGCATCTGGGACAGAGTTGGGCACCAGAACACCGCCAAGGGCCAAGCAACGCCAGAGGTGGCCAGTGACAGTTACCACAAGGTGGACACTGACGTCGCCCTGCTTCGTGGCCTCCGGGCCCAGGTCTACAAGTTCTCCATCTCCTGGTCCCGCATCTTCCCCACTGGGCAGGGGCAGAGCCCCAACCTCCGGGGCGTCGCCTACTACAACATGCTGATCGACAGGCTGCTGGACTCGCACATTGAGCCCATGGCCACGCTGTCCCACTGGGACCTGCCTCAGGCCCTGCAGGATCGCGGCGGGTGGCAGAATGAGAGCGTGGTGGATGCCTTCCTGGACTATGCGGCCTTCTGCTTCTCCACGTTTGGGGACCGTGTGAAGCTGTGGGTGACCTTCCACGAGCCATGGGTGATGAGCTACGCGGGCTACGGCACCGGCCAACACGCACCGGGCATCTCCAGCCCAGGGGTGGCCTCTTTTAAGGTGGCTCACGTGGTCCTCAAGGCTCATGCCAGGGCTTGGCACCACTACAACAGCCAACATCGCCCACAGCAGCAGGGGCGGGTGGGCATTGTGCTGAACTCAGACTGGGCAGAGCCCCTGTCCCCAGAGAGGCCTGAGGACCGGAGAGCCTCTGAACGCTTCCTGCACTTCATGCTGGGCTGGTTTGCACACCCCATCTTTGTGGATGGAGACTACCCGGCTGCCCTGAGAGCCCAGATCCAACAGACGAACAAACAGTGCCCCACTCCTGTGGCCCAGCTCCCTAAGTTCACCGAGGCAGAGAAGCAGCTCCTGAAGGGCTCCGCTGACTTTCTGGGTCTGTCCCATTACACTTCCCGCCTCATCAGCAAGGCCCAAGGAGATACCTGTGTCCCCAGCTATGATACCATTGGAGGCTTCTCCCAACACGTGGACCCTGCGTGGCCCCAGACCGAATCCCCTTGGATTCGTGTGGTACCCTGGGGTATAAGGAGGCTGTTGCAGTTTGTATCCTTGGAATACACAAGAGGCAAAGTTCCAATCTACCTGGCTGGGAATGGCATGCCCATAGGGGAAAGTGAAGATCTCATCAATGATTCCTTGAGAATTGACTACTTCAATCAATATATCAATGAGGTGCTCAAGGCTGTCAAGGAGGACTCAGTGGATGTTCAATCTTACATTGCTCGTTCCCTCATCGACGGCTTCGAAGGCCCCTCTGGGTACAGCCAGAGGTTTGGGCTGTACCATGTCAACTTCAACGACAGCAGCAGGCCAAGGACTCCCAGGAAATCTGCCTACTTTTTCACCAGCATTATTGAAAAGAACGGTTTCCTCACCAAGGTAGTAAAAAGACTGCCACCAGCCAGTAAAGCAAACGTCCCCCGGAAAATCAGAGCCTTCACATTTCCATCCGAGGTGCCCTCCAAGGCTAAAGTAGTCTGGGAAAAGTTCTCCAACCAACCCAAGTTTGAAAGAGATTTGTTCTACCACGGCACATTCCGGGATGACTTCCTGTGGGGCGTGTCCTCGTCAGCCTATCAGATTGAAGGAGCTTGGGATGCTGATGGCAAAGGCCCCAGCATCTGGGATAATTTTACCCACACACCAGGGAGCAACGTGAAAGACAGTGCCACTGGAGACATAGCCTGTGACAGCTATAACCATCTGGATGCTGATCTGAATATGCTTCGAGCTTTGAAGGTGAAGGCCTATCGCTTCTCCATCTCCTGGTCTCGGATTTTCCCGACTGGAAGAAACACTTCTGTCAACACACGTGGTGTTGATTATTACAACAGGCTGATTGATGGCTTGGTGGCAAGCAGCATCTCTCCCATGGTGACACTGTTCCACTGGGACCTGCCCCAGGCCCTCCAGGATATTGGAGGCTGGGAGAATCCTTCCTTGATTGAGTTGTTTAACAGCTATGCAGACTTTTGTTTCCAGACCTTTGGTGACAGAGTCAAGTTCTGGATGACTTTTAACGACCCCACATACCAGGCCTGGTTGGGGTATGGCTCAGGGGAATTTCCCCCAAACGTGAACGACCCAGGCTGGGGACCTTACAGGATTGGCCATGCAATCATCAAAGCTCATGCCAGAGTCTATCACACTTACGATGAGAAGTACAGGCAAGAGCAGAAGGGGGTCATCTCTTTGAGCCTTGGTGCACACTGGGCAGAGCCCCAGTCGCCTGGGGTCCCCAGGGATGTGGAGGCAGCTGACCGAATGCTGCAGTTCTCACTGGGCTGGTTCGCCCACCCCATCTTCCGAAACGGAGACTATCCCGATGCCATGAAGTGGAAAGTGGGGAACAGGAGTGAACTGCAGCACTTAGCCACCTCCCGCCTGCCCAGCTTCACTGAGGAAGAGAAGAGGTACATCTCAGCTACAGCCGACGTGTTCTGCCTCAACACCTACTCCTCCAGAATCGTGCGGCATGCAACACCGAGGTTAAACCCACCCTCCTATGAAGATGACCGGGAGCTGACCGAGAGGGAGGACTCTTCCTGGCCCTCCACAGCAATGAACAGAGCTGCGTCCTGGGGGATGCGAAGACTGCTCAACTGGATCAAGGAGGAGTATGGGGGCGTCCCCATTTACATCACTGAAAACGGAGCAGGGCTGAAAGATCCGAAAGTGGAAGATACCAATAGGATATTTTACCACAAAACCTATATCAATGAAGCTTTGAAAGCTTACAGGCTCGATGGTGTCGACCTTCGAGGATATGCTGCATGGTCCCTGATGGACAGCTTTGAGTGGCTAAATGGCTACACGGTCAAGTTCGGACTGTACCATGTTAATTTCAATAACGTGAACAGGCCTCGCACAGCAAGAGCCTCTGCCAGGTACTACACGGAGACCATGTCTTGTCATCTTGAGATTGAAGGTGCGTGGAGAGCAGATGGCAAAGGGCTCAGTATTTGGGACACGTTTTCTCACACACCACTGAGGGTTGGGAATGATGACACTGGAGACGTGGCCTGTGACAGTTATCACAAGATTGCCGAGGATGTGGTCGCCCTGCAGAACCTGGGTGTGACCCACTATCGCTTTTCCATCTCTTGGACTCGCCTCCTCCCTGACGGAACTACCAAATACATCAATGAAGCAGGCCTGAACTACTACATGCGGCTCATCGACACGCTGCAGGCTGCCAGCATCCAGCCCCAGGTGACCATTTACCACTGGGACTTGCCGCAGGCACTCCAGGATGTCGGAGGCTGGGAGAATGAGACGGTTGTACAGCGGTTTAAGGAGTATGCAGATGTGCTCTTCCAGAGGCTGGGGGACAAGGTGAAGTTTTGGATCACACTGAACGAGCCCTATGTCATTGCTAACCTGGGCTATGGCTATGGGACAGCAGCTCCAGGGAGTAGCCAGCAGGACCCTCCTAAGGGCAGCCAGCCGCATCTGTCAAGTCCAGGGCCCATGCTCAAATCGGTTCACATCCCTCAAGCTACAGTGGGTGAGAACATCGCCCTGCCCACATTCATGGGAGGCTGGTTCGCACATCCGATTTTCAAGAATGGGGATTACCCCGAGGTGATGAAGACACGGGTTCGTGACAGGAGCTTGGCGGCAGGCCTCAACAAGTCTCGGCTCCCTGAGTTCACAGAGAGTGAGAAGAGGAGGATCAACGGCACCTATGACTTTTTTGGGTTCAATCACTACACCACTGTCCTGGCCTACGATATCAACTATGCCTCTTGGATCTCTTCCTTCGATGCAGACAGGGGAGTTGCCTCCGTCACAGATCGCTCTTGGCCAGACTCTGGCTCCTTCTGGCTGAAGATGACACCTTTCGGCTTCAGGAGGATCCTGAACTGGTTAAAGGAGGAGTACAACAACCCCCCGATCTACGTAACAGAAAATGGAGTGTCCCAGCGGGAAGAATCAGACCTCAACGACACTGCTAGGATCTATTACCTCCGCAGTTACATCAACGAGGCGCTCAAAGCTGTGCAGGATAAGGTGGACCTTCGAGGATACACGGTTTGGACTCTGATGGACAACTTTGAGTGGGCCACAGGCTTCGCAGAGAAGTTCGGTGTGCATTTCGTGAACTATACTGACACTTCTCTGCCAAGGATCCCCAAAGCGTCGGCCAAGTTCTACGCCTCCATAGTCCGGTGCAACGGCTTCCCTGACCCCGCTGCAGGGCCACACCCTTGTCTGCAGCAAGATGCTGAGCCCACCACCAGCCCCATGAGAGAAGAGGACGTTCAGTTCCTGGGGCTCAGGCTGGGTACAGCAGAGGCCCAGACAGCACTGTATGTACTCTTTGCTCTAATGCTGCTTGGAGTCTGTGGTGTGGCGTTTCTGTCCTACAAGTACTGTAAGCGCTCCAAGCAAAAGCAAACACAACCAGGTGAACAGGAATTGAGCTATAGTTCTTCATTCTGA

Related Sequences

bmy_10550T0 Protein

Length: 1642 aa      View alignments
>bmy_10550T0
MILFTYFQDAVDFLSLDLSYECQSEADFRQKLSKLQTIEPKVKVFIFNLKLQDCLSTKKNPSDLFFSLLTAISEEQVLTIGFDLSTFLSCSSSSKKSRSCSLTDNLTLQTALQLDPETAVDSSLPHSAYQRVWEMFANQSRAERDAFLQDVFPEGFLWGVSTGAFNVEGGWAEDGRGASIWDRVGHQNTAKGQATPEVASDSYHKVDTDVALLRGLRAQVYKFSISWSRIFPTGQGQSPNLRGVAYYNMLIDRLLDSHIEPMATLSHWDLPQALQDRGGWQNESVVDAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHAPGISSPGVASFKVAHVVLKAHARAWHHYNSQHRPQQQGRVGIVLNSDWAEPLSPERPEDRRASERFLHFMLGWFAHPIFVDGDYPAALRAQIQQTNKQCPTPVAQLPKFTEAEKQLLKGSADFLGLSHYTSRLISKAQGDTCVPSYDTIGGFSQHVDPAWPQTESPWIRVVPWGIRRLLQFVSLEYTRGKVPIYLAGNGMPIGESEDLINDSLRIDYFNQYINEVLKAVKEDSVDVQSYIARSLIDGFEGPSGYSQRFGLYHVNFNDSSRPRTPRKSAYFFTSIIEKNGFLTKVVKRLPPASKANVPRKIRAFTFPSEVPSKAKVVWEKFSNQPKFERDLFYHGTFRDDFLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKDSATGDIACDSYNHLDADLNMLRALKVKAYRFSISWSRIFPTGRNTSVNTRGVDYYNRLIDGLVASSISPMVTLFHWDLPQALQDIGGWENPSLIELFNSYADFCFQTFGDRVKFWMTFNDPTYQAWLGYGSGEFPPNVNDPGWGPYRIGHAIIKAHARVYHTYDEKYRQEQKGVISLSLGAHWAEPQSPGVPRDVEAADRMLQFSLGWFAHPIFRNGDYPDAMKWKVGNRSELQHLATSRLPSFTEEEKRYISATADVFCLNTYSSRIVRHATPRLNPPSYEDDRELTEREDSSWPSTAMNRAASWGMRRLLNWIKEEYGGVPIYITENGAGLKDPKVEDTNRIFYHKTYINEALKAYRLDGVDLRGYAAWSLMDSFEWLNGYTVKFGLYHVNFNNVNRPRTARASARYYTETMSCHLEIEGAWRADGKGLSIWDTFSHTPLRVGNDDTGDVACDSYHKIAEDVVALQNLGVTHYRFSISWTRLLPDGTTKYINEAGLNYYMRLIDTLQAASIQPQVTIYHWDLPQALQDVGGWENETVVQRFKEYADVLFQRLGDKVKFWITLNEPYVIANLGYGYGTAAPGSSQQDPPKGSQPHLSSPGPMLKSVHIPQATVGENIALPTFMGGWFAHPIFKNGDYPEVMKTRVRDRSLAAGLNKSRLPEFTESEKRRINGTYDFFGFNHYTTVLAYDINYASWISSFDADRGVASVTDRSWPDSGSFWLKMTPFGFRRILNWLKEEYNNPPIYVTENGVSQREESDLNDTARIYYLRSYINEALKAVQDKVDLRGYTVWTLMDNFEWATGFAEKFGVHFVNYTDTSLPRIPKASAKFYASIVRCNGFPDPAAGPHPCLQQDAEPTTSPMREEDVQFLGLRLGTAEAQTALYVLFALMLLGVCGVAFLSYKYCKRSKQKQTQPGEQELSYSSSF*